WormBase-Caltech Weekly Calls

From WormBaseWiki
Jump to navigationJump to search

Previous Years

2009 Meetings

2011 Meetings

2012 Meetings

2013 Meetings

2014 Meetings

2015 Meetings

2016 Meetings

2017 Meetings

2018 Meetings


GoToMeeting link: https://www.gotomeet.me/wormbase1

2019 Meetings

January

February


March 28, 2019

Textpresso Central vs Old Textpresso site

  • A search for "SimpleMine" got 1 paper in TPC, 5 papers in the old site.
  • A search for "alg-5" in TPC got 6 hits but the first two were redundant. The result missed pmid29927939 that was found by the old site.


March 21, 2019

IWM 2019 workshop

Topic/Speaker

  • Start with gene page, that's when you have a single gene --Kimberly
  • Then go on to data mining, for multiple genes--SimpleMine, WormMine, Parasite BioMart etc --Wen and Chris
  • Then you can also visualize data with these tools-WoBR, SoBA, etc
  • If you are interested in other species, find cross-species data at the Alliance --Ranjana
  • Help us curate your data! End with community curation-New Author First pass form, community curation forms--Daniela

I think we have a good flow here, can keep thinking about this. Ranjana will shorten abstract and submit final list first week of April.

IWM 2019 swag ideas

  • WormBase sticker
    • Micropub folks have done stickers, in Paul's office, take a look
    • Daniela will look into this, pricing and time
  • Gary's ideas:
    • Screen cleaning cloths with community curation theme on them, he will send around the picture
    • Water bottles for the top community curators
    • Fidget spinners, with the WB picture in the middle
    • Gary will talk to Daniel to see if he can help with finding sellers/prices

We could do them all , a mixture, depending on the budget, need to ask Paul S. what the budget is for IWM swag


March 7, 2019

IWM workshop

  • Still haven't heard back from organizers yet

IWM swag

  • Think of ideas for the meeting

Upload

  • Local upload to Spica is Tuesday, March 12th, 10am Pacific

Trustworthy data repositories workshop

  • Chris will go to NIH, April 8 and 9
  • To discuss trustworthiness standards for data repositories