Difference between revisions of "WormBase-Caltech Weekly Calls"
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* Have tried to create a logical definition pattern for these terms, but the vagueness of the meaning of "defective" and how it is distinct from "abnormal" has stalled the process | * Have tried to create a logical definition pattern for these terms, but the vagueness of the meaning of "defective" and how it is distinct from "abnormal" has stalled the process | ||
* What do we mean exactly by "defective" and how, specifically, is this distinct from "abnormal"? | * What do we mean exactly by "defective" and how, specifically, is this distinct from "abnormal"? | ||
+ | * Definitions include meanings or words: | ||
+ | ** "aberrant" | ||
+ | ** "defective" | ||
+ | ** "defects" | ||
+ | ** "deficiency" | ||
+ | ** "disrupted" | ||
+ | ** "ineffective" | ||
+ | ** "perturbation that disrupts" | ||
+ | ** failure to execute the characteristic response = abnormal? | ||
+ | ** abnormal | ||
+ | ** abnormality leading to specific outcomes | ||
+ | ** fail to exhibit the same taxis behavior = abnormal? | ||
+ | ** failure | ||
+ | ** failure OR delayed | ||
+ | ** failure/abnormal |
Revision as of 17:59, 12 September 2019
Contents
Previous Years
GoToMeeting link: https://www.gotomeet.me/wormbase1
2019 Meetings
September 12, 2019
Update on SVM pipeline
Clarifying definitions of "defective" and "deficient" for phenotypes
- WB phenotype ontology has many "variant/abnormal" terms and distinct subclass terms for "defective/deficient"
- Have tried to create a logical definition pattern for these terms, but the vagueness of the meaning of "defective" and how it is distinct from "abnormal" has stalled the process
- What do we mean exactly by "defective" and how, specifically, is this distinct from "abnormal"?
- Definitions include meanings or words:
- "aberrant"
- "defective"
- "defects"
- "deficiency"
- "disrupted"
- "ineffective"
- "perturbation that disrupts"
- failure to execute the characteristic response = abnormal?
- abnormal
- abnormality leading to specific outcomes
- fail to exhibit the same taxis behavior = abnormal?
- failure
- failure OR delayed
- failure/abnormal