Difference between revisions of "WormBase-Caltech Weekly Calls"
From WormBaseWiki
Jump to navigationJump to searchLine 57: | Line 57: | ||
=== ECO terms for genome editing === | === ECO terms for genome editing === | ||
− | * Asking group's feedback on ECO terms for genome editing | + | * Asking group's feedback on ECO terms for genome editing (Daniela) |
Revision as of 17:35, 10 May 2018
Contents
Previous Years
GoToMeeting link: https://www.gotomeet.me/wormbase1
2018 Meetings
May 3, 2018
SimpleMine output
- Wen was working on simplification of SimpleMine output
- Considering removing general terms in an ontology when more specific terms exist
- Concern that we would be removing information; will keep terms
SPELL topics
- Topics in SPELL need some organization, possibly trimming
- We could create a graph (SObA) display of topics (based on GO process)
SPELL problem with WS265
- Wen had to debug; SPELL has limit of how many genes can be processed per data set (46,340)
- Wen trying to accommodate, deleting some genes from data set that had no expression (kludge)
- Wen will write to Matt Hibbs to ask how to deal with
- Will Alliance work together on a system to analyze large scale expression data?
Curator candidate
- Will arrive at 10am
- Skype calls with remote curators
- Curators will send group Skype handle and requested time to talk
May 10, 2018
ECO terms for genome editing
- Asking group's feedback on ECO terms for genome editing (Daniela)