Difference between revisions of "WormBase-Caltech Weekly Calls"

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* Wen will write to Matt Hibbs to ask how to deal with
 
* Wen will write to Matt Hibbs to ask how to deal with
 
* Will Alliance work together on a system to analyze large scale expression data?
 
* Will Alliance work together on a system to analyze large scale expression data?
 +
 +
=== Curator candidate ===
 +
* Will arrive at 10am
 +
* Skype calls with remote curators
 +
* Curators will send group Skype handle and requested time to talk

Revision as of 16:05, 3 May 2018

Previous Years

2009 Meetings

2011 Meetings

2012 Meetings

2013 Meetings

2014 Meetings

2015 Meetings

2016 Meetings

2017 Meetings


GoToMeeting link: https://www.gotomeet.me/wormbase1


2018 Meetings

January

February

March

April


May 3, 2018

SimpleMine output

  • Wen was working on simplification of SimpleMine output
  • Considering removing general terms in an ontology when more specific terms exist
  • Concern that we would be removing information; will keep terms

SPELL topics

  • Topics in SPELL need some organization, possibly trimming
  • We could create a graph (SObA) display of topics (based on GO process)

SPELL problem with WS265

  • Wen had to debug; SPELL has limit of how many genes can be processed per data set (46,340)
  • Wen trying to accommodate, deleting some genes from data set that had no expression (kludge)
  • Wen will write to Matt Hibbs to ask how to deal with
  • Will Alliance work together on a system to analyze large scale expression data?

Curator candidate

  • Will arrive at 10am
  • Skype calls with remote curators
  • Curators will send group Skype handle and requested time to talk