Difference between revisions of "WormBase-Caltech Weekly Calls"

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[[WormBase-Caltech_Weekly_Calls_August_2021|August]]
 
[[WormBase-Caltech_Weekly_Calls_August_2021|August]]
  
 
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[[WormBase-Caltech_Weekly_Calls_September_2021|September]]
== September 2, 2021 ==
 
 
 
1. Moving forward with Alliance-friendly Person pages for community curation/authorship tracking<br>
 
Needed for
 
*AFP community curation
 
*microPublication author tracking for all species
 
*stub of person Alliance model already exists made by Adam http://dev.alliancegenome.org:11223/redoc#tag/Person
 
 
 
Problems:
 
*this is not an Alliance-wide interest for tracking their communities person; however, Alliance is not against person pages, just not supportive of developing this class into the many ways it will be useful for us and our communities
 
*need to do this outside of Alliance
 
 
 
Action
 
*Paul talks to zfin about interest in person pages
 
*Juancarlos talks to Cecilia -need to know important elements to make author to person connection for biolink schema
 
*Daniela and Karen invite PomBase to start harmonizing a person model, will send all Alliance an invite
 
 
 
Will do
 
*create biolink model based on current WB postgres/Caltech model
 
*Adam will add tables when we have them
 
 
 
2. Need to make sure CenGen stuff is included in this next release - need to request Todd to delay release until Adam returns from vacation to deal with it.
 
 
 
== September 16, 2021 ==
 
 
 
1. CeNGEN enriched genes per cell type data targeted for WS283.
 
 
 
2. some non-WB objects were present in the Strains and Variations lists coming from the nightly geneace dump.  Juancarlos changed the OA population script script to exclude those.
 
 
 
== September 23, 2021 ==
 
 
 
1. Help desk ticket on citing the bar graph / FPKM expression data from selected modENCODE libraries - okay to just cite WormBase or should the user cite additional, or other, resources/publications?
 
* Okay to cite WormBase, but also ask user to cite the WormBase paper (for now NAR, but in the future, Genetics)
 
* Update the WB page on citing WormBase
 
 
 
2. CeNGEN data on Gene page for WS282. A short blog to highlight.
 
 
 
3. Server room in Braun power down for no apparent reason. Reset.
 
 
 
== September 30, 2021 ==
 
 
 
1. Http mirror of FTP services
 
ftp.wormbase.org -> (HTTTPS) downloads.wormbase.org
 
caltech.wormbase.org -> (HTTP) caltech.wormbase.org/pub
 

Revision as of 15:24, 7 October 2021