Difference between revisions of "WormBase-Caltech Weekly Calls"

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*So for data flow into Alliance:
 
*So for data flow into Alliance:
 
**In the short term we will load the Molecule CV into the Alliance (Ranjana and Michael P. will work on this)
 
**In the short term we will load the Molecule CV into the Alliance (Ranjana and Michael P. will work on this)
**In the near future, groups will switch to using common data model that works for all groups and common ontology/ontologies
+
**In the near future, groups will switch to using common data model that works for all and common ontology/ontologies

Revision as of 23:12, 5 August 2020

Previous Years

2009 Meetings

2011 Meetings

2012 Meetings

2013 Meetings

2014 Meetings

2015 Meetings

2016 Meetings

2017 Meetings

2018 Meetings

2019 Meetings



2020 Meetings

January

February

March

April

May

June

July


August 6th, 2020

Experimental conditions data flow into Alliance

  • Experimental conditions used in disease annotations as Inducers (used to recapitulate the disease condition) and Modifiers (either ameliorates, exacerbates, or has no effect, on the disease condition)
  • We use the WB Molecule CV for Inducers and Modifiers in disease annotation
  • Currently Exp conditions are free text (captured in remarks) in phenotype annotations, will probably need to formalize later on
  • So for data flow into Alliance:
    • In the short term we will load the Molecule CV into the Alliance (Ranjana and Michael P. will work on this)
    • In the near future, groups will switch to using common data model that works for all and common ontology/ontologies