Difference between revisions of "WormBase-Caltech Weekly Calls"

From WormBaseWiki
Jump to navigationJump to search
(19 intermediate revisions by 7 users not shown)
Line 39: Line 39:
 
[[WormBase-Caltech_Weekly_Calls_July_2021|July]]
 
[[WormBase-Caltech_Weekly_Calls_July_2021|July]]
  
 +
[[WormBase-Caltech_Weekly_Calls_August_2021|August]]
  
 +
[[WormBase-Caltech_Weekly_Calls_September_2021|September]]
  
== August 5, 2021 ==
 
  
=== Proxy issue resolved ===
+
== October 14, 2021 ==
* Not clear what the problem was, but Sibyl transferred to new machine and now it works
 
* Could be a firewall issue somewhere but it isn't clear
 
  
=== Textpresso-Dev transfer ===
+
=== WormBase HD YouTube channel has ads ===
* Michael ordered hard drive
+
* Is there a way to turn them off? Seems like we cannot remove them entirely
* Working on transfer
 
* Do we need more backup? Have partial backup on AWS; will make complete
 
  
 
+
=== Form headers and footers no longer updating ===
== August 12, 2021 ==
+
* WS version number falls out of date; Juancarlos will manually update
 
 
=== CeNGEN graph on gene pages ===
 
* We would like to show an expression level graph on each gene page. CeNGEN prefers something similar to what we have for FPKM expression.
 
* Sibyl drafted a prototype that is 2D so that it solves the issue of fitting into one page width while making highly expressing cells prominent.
 
 
 
 
 
== August 19, 2021 ==
 
 
 
=== Caltech hosted CGIs ===
 
* Caltech IMSS is blocking some WB IP addresses likely from nefarious actors on AWS, thereby breaking WB links to Caltech-hosted CGIs
 
* Although WB uses dedicated AWS IPs, those some how still got on a black list.
 
* The ultimate solution is to move all services answering WB queries to AWS, so there is no extr-AWS network traffic.
 
* Could non-SObA CGIs move to different servers (AWS?)?
 
* SObA is resource intensive when new releases are being built but otherwise memory requirements can be tuned (affecting caching) for serving queries. We can use a local machine for building a release and then transfer the built database to a live machine in the cloud. This approach also alleviates some sysadmin load for Caltech.
 
 
 
== August 26, 2021 ==
 
 
 
=== New Wormicloud features ===
 
* Clustering similar words in word clouds
 
* Counter with the number of objects already curated by WB for papers returned by searches
 

Revision as of 18:27, 14 October 2021

Previous Years

2009 Meetings

2011 Meetings

2012 Meetings

2013 Meetings

2014 Meetings

2015 Meetings

2016 Meetings

2017 Meetings

2018 Meetings

2019 Meetings

2020 Meetings

2021 Meetings

January

February

March

April

May

June

July

August

September


October 14, 2021

WormBase HD YouTube channel has ads

  • Is there a way to turn them off? Seems like we cannot remove them entirely

Form headers and footers no longer updating

  • WS version number falls out of date; Juancarlos will manually update