Difference between revisions of "Working Group:Handling Multiple Species"

From WormBaseWiki
Jump to navigationJump to search
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
= Objectives =
 
= Objectives =
  
;;Explore available tools for presentation of comparative genomics data.
+
*Explore available tools for presentation of comparative genomics data.
;;Survey organism databases for methods of presenting and navigating between species.
+
*Survey organism databases for methods of presenting and navigating between species.
;;Identify weaknesses and limitations at WormBase.
+
*Identify weaknesses and limitations at WormBase.
  
 
= Participants =
 
= Participants =
  
;;Todd Harris (organizer)
+
*Norie de la Cruz
;;Norie de la Cruz
+
*Todd Harris (organizer)
 +
*Michael Paulini
 +
*Gary Williams
  
 
= Deliverables =
 
= Deliverables =
  
;;Codify best practices for presentation of multiple species data.
+
*Codify best practices for presentation of multiple species data.
;;Generate action items for implementation, ranging from data management to visualization.
+
*Generate action items for implementation, ranging from data management to visualization.
  
 
= Questions =
 
= Questions =
Line 20: Line 22:
 
# Is our data easy to download in batch from the FTP site?
 
# Is our data easy to download in batch from the FTP site?
 
# Are the data files on the FTP site complete, documented, created with each release?
 
# Are the data files on the FTP site complete, documented, created with each release?
 +
# Is it possible to browse WormBase with limited knowledge of C. elegans/C.elegans IDs?
  
 
= Meetings =
 
= Meetings =
 +
 +
* [[Working Group:Handling Multiple Species:Meetings-2010.11.09| 2010.11.09]]

Latest revision as of 16:42, 9 November 2010

Objectives

  • Explore available tools for presentation of comparative genomics data.
  • Survey organism databases for methods of presenting and navigating between species.
  • Identify weaknesses and limitations at WormBase.

Participants

  • Norie de la Cruz
  • Todd Harris (organizer)
  • Michael Paulini
  • Gary Williams

Deliverables

  • Codify best practices for presentation of multiple species data.
  • Generate action items for implementation, ranging from data management to visualization.

Questions

  1. Is our data logically organized and easy to find?
  2. Is our data easy to download in batch from the FTP site?
  3. Are the data files on the FTP site complete, documented, created with each release?
  4. Is it possible to browse WormBase with limited knowledge of C. elegans/C.elegans IDs?

Meetings