Difference between revisions of "Website:Genome Browser Survey"
From WormBaseWiki
Jump to navigationJump to search (Created page with '== Worm Community Survey == This questionnaire will be send to the worm community via SurveyMonkey. '''Q:''' How frequent do you use the current WormBase genome browser? * ever…') |
|||
Line 21: | Line 21: | ||
* visualization is more important than functionality | * visualization is more important than functionality | ||
* both functionality and visualization are important to me | * both functionality and visualization are important to me | ||
+ | |||
+ | '''Q:''' How much do you customize the appearance of track displays? | ||
+ | * most track displays have been customized by me | ||
+ | * I customize specific tracks only | ||
+ | * I once customized a track display and found it useful at the time | ||
+ | * I once customized a track display, but the benefits were not outstanding | ||
+ | * never customized a track display | ||
+ | |||
+ | '''Q:''' Do you download data using the WormBase genome browser? ''(multiple choice)'' | ||
+ | * alignments | ||
+ | * decorated FASTA file | ||
+ | * track data as GFF3 | ||
+ | * other: ''text field'' | ||
+ | * never downloaded any data using the genome browser | ||
'''Q:''' How do you share tracks in the WormBase genome browser? | '''Q:''' How do you share tracks in the WormBase genome browser? | ||
Line 32: | Line 46: | ||
* important: uploaded data should only be accessible to people who know the track name, but there is no need for an explicit login requirement | * important: uploaded data should only be accessible to people who know the track name, but there is no need for an explicit login requirement | ||
* unimporant; always share more data publicly | * unimporant; always share more data publicly | ||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
'''Q:''' Which data/protocol standards do you use when importing data into the genome browser? ''(multiple choice)'' | '''Q:''' Which data/protocol standards do you use when importing data into the genome browser? ''(multiple choice)'' |
Revision as of 15:39, 8 July 2013
Worm Community Survey
This questionnaire will be send to the worm community via SurveyMonkey.
Q: How frequent do you use the current WormBase genome browser?
- every day
- multiple times a week
- once a week
- once a month
- never used it
Q: Which aspect do you find most annoying about the WormBase genome browser?
- it is slow
- it is not customizable
- it is hard to use
- it visualizes data badly
- no complaints; it is just fine
Q: How to you approach the genome browser?
- functionality is more important than visualization
- visualization is more important than functionality
- both functionality and visualization are important to me
Q: How much do you customize the appearance of track displays?
- most track displays have been customized by me
- I customize specific tracks only
- I once customized a track display and found it useful at the time
- I once customized a track display, but the benefits were not outstanding
- never customized a track display
Q: Do you download data using the WormBase genome browser? (multiple choice)
- alignments
- decorated FASTA file
- track data as GFF3
- other: text field
- never downloaded any data using the genome browser
Q: How do you share tracks in the WormBase genome browser?
- via e-mail; sending a link of the genome browser view
- other; sending the data so that the other person can upload the data themselves
- never shared tracks
Q: How important are track permissions to you?
- very important: uploaded data should in some cases only be visible to me only and should not be visible to collaborators
- very important: uploaded data should in some cases only be visible to me and collaborators
- important: uploaded data should only be accessible to people who know the track name, but there is no need for an explicit login requirement
- unimporant; always share more data publicly
Q: Which data/protocol standards do you use when importing data into the genome browser? (multiple choice)
- BAM
- BED
- BedGraph
- bigBed
- bigWig
- CBS
- CN
- DAS
- FASTA
- genePred
- GFF2
- GFF3
- GISTIC
- Goby
- GTF
- GVF
- GWAS
- LOH
- MAF
- PSL
- RES
- SAM
- SEG
- SNP
- VCF
- WIG
- other: text field
Q: How often do you make use of the WormBase GBrowse REST API?
- every day
- once a week
- every now and then; as needed
- never used it, but consider using it in the future
- never used it and I will not use this feature in the foreseeable future