WebDev 2016.03.22-Agenda and Minutes
From WormBaseWiki
Jump to navigationJump to searchJBrowse & GBrowse
- Working on tutorial for uploading and sharing data in JBrowse
- Trying to figure out how to deal with making a persistant popup balloon in GBrowse in light of the default link configuration (they are incompatible)
- Adam suggested writing a JS hack to intercept the link and display the balloon--that might work.
Datomic
- Rest work--found a closure module that may help making a more standard rest interface
Web
- Continue working on Visualizing Human Variations feature:
- Getting data from Parasite: homology, aligned sequence, exon and domain position
- Created a small client to fetch and temporarily storing data for use in a variety of places
- (WIP) convert coordinates and draw graphic based on the actual data
- Problems to resolve:
- how to handle multiple splice variants
- how to handle overlapping domain assignments by multiple standards
- ensure DNA alignment and protein alignment can align correctly to each other
- Getting data from Parasite: homology, aligned sequence, exon and domain position