Difference between revisions of "WebDev 2015.02.06-Agenda and Minutes"

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** LS: Tabix format for indexing a GFF file
 
** LS: Tabix format for indexing a GFF file
  
== 3. JBrowse/GBrowse update status (Scott) ==
 
  
* Mozilla Science Project - hackathon
+
== 3. * Mozilla Science Project - hackathon ==
 
* March 7th and 8th
 
* March 7th and 8th
 
* GW has an application for showing genomic structural rearrangements -- could be an interactive application
 
* GW has an application for showing genomic structural rearrangements -- could be an interactive application
 +
* LEGO plots for genomic variation
 +
** Show all six nucleotides and tri-nucleotide context
 +
 +
== 4. JBrowse/GBrowse update status (Scott) ==
  
 
== 4. Intermine development update (Todd, for Paulo in absentia) ==
 
== 4. Intermine development update (Todd, for Paulo in absentia) ==
  
 
== 5. OAuth discussion ==
 
== 5. OAuth discussion ==

Revision as of 16:33, 6 February 2015

Agenda

1. Administration update (Todd; 5 minute)

2. WS246 / WS247 development status (Sibyl)

  • Discussion on improving FPKM images
  • Elsevier paper linking to WormBase, fixed search bugs so linking works correctly
  • Interval search progress - via GFF or Ace
    • LS: Tabix format for indexing a GFF file


3. * Mozilla Science Project - hackathon

  • March 7th and 8th
  • GW has an application for showing genomic structural rearrangements -- could be an interactive application
  • LEGO plots for genomic variation
    • Show all six nucleotides and tri-nucleotide context

4. JBrowse/GBrowse update status (Scott)

4. Intermine development update (Todd, for Paulo in absentia)

5. OAuth discussion