Difference between revisions of "WebDev 2013.08.16-Agenda and Minutes"

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== 3. General Development update (JD, Joachim) ==
 
== 3. General Development update (JD, Joachim) ==
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'''Joachim'''
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; bug fixing
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:protein view: can see multiple locations if a protein is encoded by more than one gene
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:transgene: fixed display; added unit tests for a bunch of things
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:fixing the download widget
  
 
== 4. Intermine Development (JD; 10 minutes) ==
 
== 4. Intermine Development (JD; 10 minutes) ==
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Summary:
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* table for prioritizing data loading
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* Expanded gene and transcript with updated loader specification
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* Finished CDS, except see error below
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* Data loading surprise:
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** https://github.com/WormBase/website/issues/1682
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** Unknown time required for resolution
  
 
* Documentation status and location
 
* Documentation status and location

Latest revision as of 15:24, 16 August 2013

Agenda

1. Administrative Update (Todd; 5 minutes)

2. Mobile app development (Antonio; 10 minutes)

3. General Development update (JD, Joachim)

Joachim

bug fixing
protein view: can see multiple locations if a protein is encoded by more than one gene
transgene: fixed display; added unit tests for a bunch of things
fixing the download widget

4. Intermine Development (JD; 10 minutes)

Summary:

  • table for prioritizing data loading
  • Expanded gene and transcript with updated loader specification
  • Finished CDS, except see error below


5. WS239 development objectives

As discussed 09 Aug 2013

Genome Browsers

  • Finalize and launch survey, mid September
  • Draw up requirements document
  • Short list of candidates

Administration

  • prepare NAR manuscript
  • Cloud: consolidate expiring reserved instances
  • Begin next migration steps

Intermine

  • expand coverage of existing classes, particularly:
    • variation: distinguish polymorphisms from alleles; add meaningful content on nature of molecular change
    • gene: add orthologs
      • JD: Will require 2.5 days
      • TH: Double it.
      • JD - time allotted: a little over a week
    • rnai/phenotype: time permitting