Difference between revisions of "WebDev 2013.07.05-Agenda and Minutes"

From WormBaseWiki
Jump to navigationJump to search
 
(7 intermediate revisions by 2 users not shown)
Line 2: Line 2:
  
 
== 1. IWM Review (10 minutes) ==
 
== 1. IWM Review (10 minutes) ==
 +
* expanded presence
 +
** 4 workshops
 +
*** well attended (50/180/50/120)
 +
** standardized posters
 +
** live helpdesk
 +
*** projector
 +
** handouts in abstract book
 +
 +
* Good feedback - users enjoy new site
 +
** TODO: tag discussion forum, link to objects
 +
 +
 +
* Bio Hackathon (JB)
 +
** project:
 +
*** genomic data -> RDF -> binary (compress & index) -> display on jBrowse
  
 
== 2. Quick minutes review (5 minutes) ==
 
== 2. Quick minutes review (5 minutes) ==
Line 12: Line 27:
  
 
=== 3a. Abby (10 minutes) ===
 
=== 3a. Abby (10 minutes) ===
 +
* debugging site falling over
 +
** look into mysql connections
 +
** check io/memory on machine
 +
* writing tests
  
=== 3b. JD (10 minutes) ===
+
=== 3b. Antonio (5 minutes) ===
 +
* search implemented
 +
* converting to backbone.js
 +
* next step: writing templates
 +
** tablet view: use website template
 +
** phone view - handlebars.js
  
=== 3c. Joachim (10 minutes) ===
+
=== 3c. JD (10 minutes) ===
 +
* giving more time to web issues
 +
** Process pages
 +
*** Cell lineage viewer -> Look into using Expression/lineage viewer from Tom Burgland(sp?)
  
=== 3d. Todd (5 minutes) ===
+
* IM
 +
** prioritizing tests
 +
** data issues -> for next release
 +
** most requested data additions
 +
* Documentation/Automation
 +
** TH would like progress for next release
  
== 4. Post IWM / pre WS239 tasks to complete ==
+
=== 3d. Joachim (10 minutes) ===
 +
* GBrowse - fixed polyA issue
 +
* project IDs in config
 +
* Blast page, multiple project ids -> separate dbs, show results beside each other
 +
 
 +
* Blast all Caenorhabditis - TH, new issue
 +
 
 +
=== 3e. Todd (5 minutes) ===
 +
* DNS moved from CSHL
 +
 
 +
== 4. Tasks to resolve before WS239 (16 August 2013) ==
  
 
* Finish logging / error trapping (JB)
 
* Finish logging / error trapping (JB)
* Complete outstanding GBrowse issues
+
* Expand testing suite with new use cases (JB)
 +
* Complete outstanding GBrowse issues (JB)
 
* Process page development (JD)
 
* Process page development (JD)
*  
+
* Intermine documentation and automation workflow (JD)
 +
* Crush outstanding issues (AC)
  
 
== 5. Future plans ==
 
== 5. Future plans ==
  
 
* WS239 released by Hinxton (09 Aug)
 
* WS239 released by Hinxton (09 Aug)
 +
 +
* Lineage viewer
 +
* Expression viewer
 +
* Synteny tool
 +
* Begin new genome browser exploration
 +
* Begin web backend due requirements and due diligence
 +
* Begin second phase of cloud migration

Latest revision as of 15:58, 9 July 2013

Agenda

1. IWM Review (10 minutes)

  • expanded presence
    • 4 workshops
      • well attended (50/180/50/120)
    • standardized posters
    • live helpdesk
      • projector
    • handouts in abstract book
  • Good feedback - users enjoy new site
    • TODO: tag discussion forum, link to objects


  • Bio Hackathon (JB)
    • project:
      • genomic data -> RDF -> binary (compress & index) -> display on jBrowse

2. Quick minutes review (5 minutes)

  • Error trapping & logging
  • Intermine branding
  • Intermine beta launch

3. Status of current projects

3a. Abby (10 minutes)

  • debugging site falling over
    • look into mysql connections
    • check io/memory on machine
  • writing tests

3b. Antonio (5 minutes)

  • search implemented
  • converting to backbone.js
  • next step: writing templates
    • tablet view: use website template
    • phone view - handlebars.js

3c. JD (10 minutes)

  • giving more time to web issues
    • Process pages
      • Cell lineage viewer -> Look into using Expression/lineage viewer from Tom Burgland(sp?)
  • IM
    • prioritizing tests
    • data issues -> for next release
    • most requested data additions
  • Documentation/Automation
    • TH would like progress for next release

3d. Joachim (10 minutes)

  • GBrowse - fixed polyA issue
  • project IDs in config
  • Blast page, multiple project ids -> separate dbs, show results beside each other
  • Blast all Caenorhabditis - TH, new issue

3e. Todd (5 minutes)

  • DNS moved from CSHL

4. Tasks to resolve before WS239 (16 August 2013)

  • Finish logging / error trapping (JB)
  • Expand testing suite with new use cases (JB)
  • Complete outstanding GBrowse issues (JB)
  • Process page development (JD)
  • Intermine documentation and automation workflow (JD)
  • Crush outstanding issues (AC)

5. Future plans

  • WS239 released by Hinxton (09 Aug)
  • Lineage viewer
  • Expression viewer
  • Synteny tool
  • Begin new genome browser exploration
  • Begin web backend due requirements and due diligence
  • Begin second phase of cloud migration