Difference between revisions of "WebDev 2013.06.14-Agenda and Minutes"

From WormBaseWiki
Jump to navigationJump to search
Line 27: Line 27:
 
= Intermine =
 
= Intermine =
 
* running build over the weekend
 
* running build over the weekend
 +
* From Gary, provided ace queries:
 
** Gene - only get Live genes
 
** Gene - only get Live genes
 
** CDS - only method = curated
 
** CDS - only method = curated
 
** Protein - only corresponding CDS
 
** Protein - only corresponding CDS
 +
 +
** Transcripts - attached to Genes, contains history? no ace query
 +
*** gary updated issue 1385

Revision as of 15:40, 14 June 2013

Web app

  • Proposal emailed to everyone
  • TODO: set dev.wormbase.org to serve staging code
    • stability

Error Trapping & Logging

  • JB: logging separate form installation type
    • log level on it's own
  • Web.pm - reads installation_type/env var, loads specific log4perl file
  • log4perl -

TODO: get rid of 'debug' flag

    • JB will look at this after testing
    • see issue for suggestions to expand

Intermine Branding

1) Create accounts on behalf of users, store permanent token

2) Ask users to associate Google account (/openid)

3) Run Identity Server

Intermine

  • running build over the weekend
  • From Gary, provided ace queries:
    • Gene - only get Live genes
    • CDS - only method = curated
    • Protein - only corresponding CDS
    • Transcripts - attached to Genes, contains history? no ace query
      • gary updated issue 1385