Difference between revisions of "WebDev 2013.06.03-Agenda and Minutes"
From WormBaseWiki
Jump to navigationJump to search(4 intermediate revisions by the same user not shown) | |||
Line 2: | Line 2: | ||
== Administrative notes (TH; 5 minutes) == | == Administrative notes (TH; 5 minutes) == | ||
+ | IWM - next week look through presentations | ||
+ | ** prepare slides and share with comrades | ||
+ | |||
+ | schedule time (Friday meeting?) to review presentations as a group. | ||
== Discuss WS238 development status (all; 10 minutes) == | == Discuss WS238 development status (all; 10 minutes) == | ||
+ | * GBrowse work | ||
+ | * finished most issues | ||
+ | |||
+ | Pre-baking site | ||
+ | * faster with data | ||
+ | ** found slow widgets - target for optimization | ||
+ | ** found errors (ncRNAs - sequences, others) | ||
+ | |||
+ | GBrowse - JB | ||
+ | * Kevin looked at all the tracks | ||
+ | ** mostly good except for things Kevin is reporting | ||
+ | ** elegans ESTs -> problem with aggregator?, not sure | ||
+ | ** config he wrote is good - but work wasn't very coordinated | ||
+ | *** Kevin finished work | ||
+ | |||
+ | * automate the test - retrieve gbrowse image files, diff the image (imagemagik) | ||
== Define WS238/WS239 objectives (all; 10 minutes) == | == Define WS238/WS239 objectives (all; 10 minutes) == | ||
+ | Bit of a breather before WS239. | ||
+ | |||
+ | * expand test suite - current tests obsolete (JB) | ||
+ | ** also GBrowse testing | ||
+ | * optimization - some ares are more computationally intensive (AC) | ||
+ | ** change our pre-baking strategy to generate slowest first | ||
+ | ** have logs of bugs/times | ||
+ | * improving error handling, reporting | ||
+ | ** make it easier to trap errors - where/why? | ||
+ | |||
+ | * REST api | ||
+ | ** documentation on web | ||
+ | *** needs formatting | ||
+ | ** adopt standards | ||
+ | |||
+ | * Graph databases comparison | ||
+ | |||
== Discuss Intermine progress; define critical blocking issues (JD; 10 minutes) == | == Discuss Intermine progress; define critical blocking issues (JD; 10 minutes) == | ||
+ | Main blocker: server issues (running out of resources) | ||
+ | ** 2nd server should be up soon | ||
+ | ** many issues are hinging on the new built | ||
+ | |||
+ | Asking curators for descriptions, summary view. | ||
+ | |||
+ | * Will we have time to address all these issues before IWM? | ||
+ | |||
+ | What features will we demo at IWM? | ||
+ | * templates (use cases) | ||
+ | ** available on alpha mine | ||
+ | ** make an effort to standardize grammar/format of descriptions/names (ask Chris?) | ||
+ | * some features may have to be taken out of the beta release | ||
+ | |||
+ | Branding | ||
+ | * header/footer - next week | ||
+ | * login - revisit next week | ||
+ | ** if not feasible, remove login feature | ||
+ | |||
+ | Testing | ||
+ | * acceptance tests - look at this next week w/ TH | ||
== Discuss mobile app (AC; 10 minutes) == | == Discuss mobile app (AC; 10 minutes) == | ||
* Antonio Marino - GSoC | * Antonio Marino - GSoC | ||
** unable to attend today's call due to prior commitments, but will attend future calls | ** unable to attend today's call due to prior commitments, but will attend future calls | ||
+ | * WormBase/website-mobile on github | ||
== Upcoming milestones (TH; 5 minutes) == | == Upcoming milestones (TH; 5 minutes) == | ||
Line 17: | Line 76: | ||
===Q3=== | ===Q3=== | ||
* begin exploration of genome browser options (JB) | * begin exploration of genome browser options (JB) | ||
+ | ** tough call to find a good alternative (GBrowse is very feature complete) | ||
+ | ** most other browsers, flashier, but not as feature rich | ||
+ | ** Genome Maps - from Spain (suggestion from LS) | ||
* reignite discussion of possible backends for website (AC, JB, TH) | * reignite discussion of possible backends for website (AC, JB, TH) | ||
+ | ** may want to engage build team | ||
+ | ** graph databases meetup | ||
* adopt PM tool for clearer tracking of tasks, milestones and resources (TH) | * adopt PM tool for clearer tracking of tasks, milestones and resources (TH) | ||
+ | ** formalize time management (239) | ||
===Q4=== | ===Q4=== | ||
* community survey (AC, TH) | * community survey (AC, TH) | ||
+ | ** collect more feedback | ||
* complete cloud migration (TH) | * complete cloud migration (TH) | ||
* full launch of intermine with WS240 (JD) | * full launch of intermine with WS240 (JD) | ||
== Open Table == | == Open Table == |
Latest revision as of 15:52, 7 June 2013
Contents
- 1 Review minutes of 31 May 2013 (all; 5 minutes)
- 2 Administrative notes (TH; 5 minutes)
- 3 Discuss WS238 development status (all; 10 minutes)
- 4 Define WS238/WS239 objectives (all; 10 minutes)
- 5 Discuss Intermine progress; define critical blocking issues (JD; 10 minutes)
- 6 Discuss mobile app (AC; 10 minutes)
- 7 Upcoming milestones (TH; 5 minutes)
- 8 Open Table
Review minutes of 31 May 2013 (all; 5 minutes)
Administrative notes (TH; 5 minutes)
IWM - next week look through presentations
- prepare slides and share with comrades
schedule time (Friday meeting?) to review presentations as a group.
Discuss WS238 development status (all; 10 minutes)
- GBrowse work
- finished most issues
Pre-baking site
- faster with data
- found slow widgets - target for optimization
- found errors (ncRNAs - sequences, others)
GBrowse - JB
- Kevin looked at all the tracks
- mostly good except for things Kevin is reporting
- elegans ESTs -> problem with aggregator?, not sure
- config he wrote is good - but work wasn't very coordinated
- Kevin finished work
- automate the test - retrieve gbrowse image files, diff the image (imagemagik)
Define WS238/WS239 objectives (all; 10 minutes)
Bit of a breather before WS239.
- expand test suite - current tests obsolete (JB)
- also GBrowse testing
- optimization - some ares are more computationally intensive (AC)
- change our pre-baking strategy to generate slowest first
- have logs of bugs/times
- improving error handling, reporting
- make it easier to trap errors - where/why?
- REST api
- documentation on web
- needs formatting
- adopt standards
- documentation on web
- Graph databases comparison
Discuss Intermine progress; define critical blocking issues (JD; 10 minutes)
Main blocker: server issues (running out of resources)
- 2nd server should be up soon
- many issues are hinging on the new built
Asking curators for descriptions, summary view.
- Will we have time to address all these issues before IWM?
What features will we demo at IWM?
- templates (use cases)
- available on alpha mine
- make an effort to standardize grammar/format of descriptions/names (ask Chris?)
- some features may have to be taken out of the beta release
Branding
- header/footer - next week
- login - revisit next week
- if not feasible, remove login feature
Testing
- acceptance tests - look at this next week w/ TH
Discuss mobile app (AC; 10 minutes)
- Antonio Marino - GSoC
- unable to attend today's call due to prior commitments, but will attend future calls
- WormBase/website-mobile on github
Upcoming milestones (TH; 5 minutes)
Q3
- begin exploration of genome browser options (JB)
- tough call to find a good alternative (GBrowse is very feature complete)
- most other browsers, flashier, but not as feature rich
- Genome Maps - from Spain (suggestion from LS)
- reignite discussion of possible backends for website (AC, JB, TH)
- may want to engage build team
- graph databases meetup
- adopt PM tool for clearer tracking of tasks, milestones and resources (TH)
- formalize time management (239)
Q4
- community survey (AC, TH)
- collect more feedback
- complete cloud migration (TH)
- full launch of intermine with WS240 (JD)