Difference between revisions of "WebDev 2013.04.22-Agenda and Minutes"

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==  JD ==
 
==  JD ==
 
=== Intermine Data Loading ===
 
=== Intermine Data Loading ===
 +
* going well
 +
* loaded:
 +
** elegans: gene, transcript, cds locations
 +
** all species: gene, transcript, cds, protein, variation, phenotype, go_term, sequences data
 +
* build times: takes ~14 hours
 +
* currently loading gene expression (expression cluster/pattern, life stage, others)
 +
* data loading deadline - Tuesday (may not make this due to loading time)
 +
** afterwards will focus on ui, train curators
 +
 +
* migrated primary working directory to nfs mount - yay space!
  
 
== Joachim ==
 
== Joachim ==
 
=== GBrowse Installation ===
 
=== GBrowse Installation ===
 +
* installed apached on wb-dev
 +
** redid 2.54 gbrowse build - running standalone
 +
** haven't tested inside web interface
 +
* updating README, and wiki
 +
* gbrowse installation in local directory
  
 
== Abby ==
 
== Abby ==
 
=== External urls ===
 
=== External urls ===
 +
* working with Daniela, moving Picture page links over
 
=== Disease page===
 
=== Disease page===
 +
* for Ranjana to be done in WS237
 +
 +
* also working on other WS237 issues
 +
https://github.com/WormBase/website/issues?direction=desc&milestone=8&page=1&sort=updated&state=open

Revision as of 15:25, 26 April 2013

Attending: Abby, JD, Joachim Regrets: Todd

Location: 5th floor kitchen

Update with agenda items

Agenda

Updates from everyone.

JD

Intermine Data Loading

  • going well
  • loaded:
    • elegans: gene, transcript, cds locations
    • all species: gene, transcript, cds, protein, variation, phenotype, go_term, sequences data
  • build times: takes ~14 hours
  • currently loading gene expression (expression cluster/pattern, life stage, others)
  • data loading deadline - Tuesday (may not make this due to loading time)
    • afterwards will focus on ui, train curators
  • migrated primary working directory to nfs mount - yay space!

Joachim

GBrowse Installation

  • installed apached on wb-dev
    • redid 2.54 gbrowse build - running standalone
    • haven't tested inside web interface
  • updating README, and wiki
  • gbrowse installation in local directory

Abby

External urls

  • working with Daniela, moving Picture page links over

Disease page

  • for Ranjana to be done in WS237
  • also working on other WS237 issues

https://github.com/WormBase/website/issues?direction=desc&milestone=8&page=1&sort=updated&state=open