Difference between revisions of "WebDev 2013.04.22-Agenda and Minutes"
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+ | Attending: Abby, JD, Joachim | ||
+ | |||
+ | Regrets: Todd | ||
+ | |||
+ | Location: 5th floor kitchen | ||
+ | |||
+ | Update with agenda items | ||
+ | |||
= Agenda = | = Agenda = | ||
Updates from everyone. | Updates from everyone. | ||
− | |||
− | |||
− | |||
== JD == | == JD == | ||
=== Intermine Data Loading === | === Intermine Data Loading === | ||
+ | * going well | ||
+ | * loaded: | ||
+ | ** elegans: gene, transcript, cds locations | ||
+ | ** all species: gene, transcript, cds, protein, variation, phenotype, go_term, sequences data | ||
+ | * build times: takes ~14 hours | ||
+ | * currently loading gene expression (expression cluster/pattern, life stage, others) | ||
+ | * data loading deadline - Tuesday (may not make this due to loading time) | ||
+ | ** afterwards will focus on ui, train curators | ||
+ | |||
+ | * migrated primary working directory to nfs mount - yay space! | ||
== Joachim == | == Joachim == | ||
=== GBrowse Installation === | === GBrowse Installation === | ||
+ | * installed apached on wb-dev | ||
+ | ** redid 2.54 gbrowse build - running standalone | ||
+ | ** haven't tested inside web interface | ||
+ | * updating README, and wiki | ||
+ | * gbrowse installation in local directory | ||
== Abby == | == Abby == | ||
=== External urls === | === External urls === | ||
+ | * working with Daniela, moving Picture page links over | ||
=== Disease page=== | === Disease page=== | ||
+ | * for Ranjana to be done in WS237 | ||
+ | |||
+ | * also working on other WS237 issues | ||
+ | https://github.com/WormBase/website/issues?direction=desc&milestone=8&page=1&sort=updated&state=open |
Latest revision as of 15:27, 26 April 2013
Attending: Abby, JD, Joachim
Regrets: Todd
Location: 5th floor kitchen
Update with agenda items
Contents
Agenda
Updates from everyone.
JD
Intermine Data Loading
- going well
- loaded:
- elegans: gene, transcript, cds locations
- all species: gene, transcript, cds, protein, variation, phenotype, go_term, sequences data
- build times: takes ~14 hours
- currently loading gene expression (expression cluster/pattern, life stage, others)
- data loading deadline - Tuesday (may not make this due to loading time)
- afterwards will focus on ui, train curators
- migrated primary working directory to nfs mount - yay space!
Joachim
GBrowse Installation
- installed apached on wb-dev
- redid 2.54 gbrowse build - running standalone
- haven't tested inside web interface
- updating README, and wiki
- gbrowse installation in local directory
Abby
External urls
- working with Daniela, moving Picture page links over
Disease page
- for Ranjana to be done in WS237
- also working on other WS237 issues
https://github.com/WormBase/website/issues?direction=desc&milestone=8&page=1&sort=updated&state=open