Difference between revisions of "WebDev 2010.06.16-Agenda and Minutes"

From WormBaseWiki
Jump to navigationJump to search
Line 11: Line 11:
  
 
== 4. Ontology Search update (Norie; 10 minutes) ==
 
== 4. Ontology Search update (Norie; 10 minutes) ==
 +
 +
ontology search form:
 +
 +
multi-ontology: http://dev.wormbase.org/db/ontology/search
 +
go: http://dev.wormbase.org/db/ontology/gene
 +
anatomy: http://dev.wormbase.org/db/ontology/anatomy
 +
phenotype: http://dev.wormbase.org/db/misc/phenotype
 +
 +
 +
search resutls:
 +
 +
search all ontologies for unc-26:
 +
 +
http://dev.wormbase.org/db/ontology/search?ontologies=biological_process&ontologies=cellular_component&ontologies=molecular_function&ontologies=anatomy&ontologies=phenotype&query=unc-26&sort=alpha&filters=d&filters=s&Submit=Submit&.cgifields=with_annotations_only&.cgifields=filters&.cgifields=string_modifications&.cgifields=ontologies
 +
 +
search all ontologies for egg:
 +
 +
http://dev.wormbase.org/db/ontology/search?ontologies=biological_process&ontologies=cellular_component&ontologies=molecular_function&ontologies=anatomy&ontologies=phenotype&query=egg&sort=alpha&filters=d&filters=s&Submit=Submit&.cgifields=with_annotations_only&.cgifields=filters&.cgifields=string_modifications&.cgifields=ontologies
  
 
== 5. Open Table ==
 
== 5. Open Table ==

Revision as of 15:51, 16 June 2010

Agenda

1. Administrative Update (Todd; 5 minutes)

2. API development update and goals (Xq & Norie, 15 minutes)

3. modENCODE liftover status (Xq and Todd; 5 minutes)

4. Ontology Search update (Norie; 10 minutes)

ontology search form:

multi-ontology: http://dev.wormbase.org/db/ontology/search go: http://dev.wormbase.org/db/ontology/gene anatomy: http://dev.wormbase.org/db/ontology/anatomy phenotype: http://dev.wormbase.org/db/misc/phenotype


search resutls:

search all ontologies for unc-26:

http://dev.wormbase.org/db/ontology/search?ontologies=biological_process&ontologies=cellular_component&ontologies=molecular_function&ontologies=anatomy&ontologies=phenotype&query=unc-26&sort=alpha&filters=d&filters=s&Submit=Submit&.cgifields=with_annotations_only&.cgifields=filters&.cgifields=string_modifications&.cgifields=ontologies

search all ontologies for egg:

http://dev.wormbase.org/db/ontology/search?ontologies=biological_process&ontologies=cellular_component&ontologies=molecular_function&ontologies=anatomy&ontologies=phenotype&query=egg&sort=alpha&filters=d&filters=s&Submit=Submit&.cgifields=with_annotations_only&.cgifields=filters&.cgifields=string_modifications&.cgifields=ontologies

5. Open Table