Difference between revisions of "WebDev 2010.06.16-Agenda and Minutes"
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== 1. Administrative Update (Todd; 5 minutes) == | == 1. Administrative Update (Todd; 5 minutes) == | ||
+ | |||
+ | * development deadline today (06/16) | ||
+ | * some bitbucket tickets for OICR | ||
== 2. API development update and goals (Xq & Norie, 15 minutes) == | == 2. API development update and goals (Xq & Norie, 15 minutes) == | ||
− | + | Discussion: how to make rich information easier to present -- | |
− | + | * global navigation bar | |
+ | * contextual nav bar | ||
+ | * use 2 panel selector | ||
+ | * use wireframing | ||
+ | * other suggestions? | ||
+ | |||
+ | demos: | ||
+ | |||
+ | *sequence page: http://beta.wormbase.org/reports/sequence/JC8.10a/?view=page | ||
+ | *protein page: http://beta.wormbase.org/reports/protein/WP:CE28239/?view=page | ||
== 3. modENCODE liftover status (Xq and Todd; 5 minutes) == | == 3. modENCODE liftover status (Xq and Todd; 5 minutes) == | ||
+ | |||
+ | *track rearrangement: http://wb-gb1.oicr.on.ca:8085/fgb2/gbrowse/c_elegans/ | ||
== 4. Ontology Search update (Norie; 10 minutes) == | == 4. Ontology Search update (Norie; 10 minutes) == | ||
+ | |||
+ | ontology search form: | ||
+ | |||
+ | * multi-ontology: http://dev.wormbase.org/db/ontology/search | ||
+ | * go: http://dev.wormbase.org/db/ontology/gene | ||
+ | * anatomy: http://dev.wormbase.org/db/ontology/anatomy | ||
+ | * phenotype: http://dev.wormbase.org/db/misc/phenotype | ||
+ | |||
+ | |||
+ | search resutls: | ||
+ | |||
+ | search all ontologies for unc-26: | ||
+ | |||
+ | http://dev.wormbase.org/db/ontology/search?ontologies=biological_process&ontologies=cellular_component&ontologies=molecular_function&ontologies=anatomy&ontologies=phenotype&query=unc-26&sort=alpha&filters=d&filters=s&Submit=Submit&.cgifields=with_annotations_only&.cgifields=filters&.cgifields=string_modifications&.cgifields=ontologies | ||
+ | |||
+ | search all ontologies for egg: | ||
+ | |||
+ | http://dev.wormbase.org/db/ontology/search?ontologies=biological_process&ontologies=cellular_component&ontologies=molecular_function&ontologies=anatomy&ontologies=phenotype&query=egg&sort=alpha&filters=d&filters=s&Submit=Submit&.cgifields=with_annotations_only&.cgifields=filters&.cgifields=string_modifications&.cgifields=ontologies | ||
== 5. Open Table == | == 5. Open Table == |
Latest revision as of 16:11, 16 June 2010
Contents
Agenda
1. Administrative Update (Todd; 5 minutes)
- development deadline today (06/16)
- some bitbucket tickets for OICR
2. API development update and goals (Xq & Norie, 15 minutes)
Discussion: how to make rich information easier to present --
- global navigation bar
- contextual nav bar
- use 2 panel selector
- use wireframing
- other suggestions?
demos:
- sequence page: http://beta.wormbase.org/reports/sequence/JC8.10a/?view=page
- protein page: http://beta.wormbase.org/reports/protein/WP:CE28239/?view=page
3. modENCODE liftover status (Xq and Todd; 5 minutes)
- track rearrangement: http://wb-gb1.oicr.on.ca:8085/fgb2/gbrowse/c_elegans/
4. Ontology Search update (Norie; 10 minutes)
ontology search form:
- multi-ontology: http://dev.wormbase.org/db/ontology/search
- go: http://dev.wormbase.org/db/ontology/gene
- anatomy: http://dev.wormbase.org/db/ontology/anatomy
- phenotype: http://dev.wormbase.org/db/misc/phenotype
search resutls:
search all ontologies for unc-26:
search all ontologies for egg: