Difference between revisions of "WebDev 2010.06.16-Agenda and Minutes"

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== 1. Administrative Update (Todd; 5 minutes) ==
 
== 1. Administrative Update (Todd; 5 minutes) ==
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* development deadline today (06/16)
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* some bitbucket tickets for OICR
  
 
== 2. API development update and goals (Xq & Norie, 15 minutes) ==
 
== 2. API development update and goals (Xq & Norie, 15 minutes) ==
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Discussion: how to make rich information easier to present --
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* global navigation bar
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* contextual nav bar
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* use 2 panel selector
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* use wireframing
 +
* other suggestions?
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 +
demos:
  
 
*sequence page: http://beta.wormbase.org/reports/sequence/JC8.10a/?view=page
 
*sequence page: http://beta.wormbase.org/reports/sequence/JC8.10a/?view=page
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== 3. modENCODE liftover status (Xq and Todd; 5 minutes) ==
 
== 3. modENCODE liftover status (Xq and Todd; 5 minutes) ==
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*track rearrangement: http://wb-gb1.oicr.on.ca:8085/fgb2/gbrowse/c_elegans/
  
 
== 4. Ontology Search update (Norie; 10 minutes) ==
 
== 4. Ontology Search update (Norie; 10 minutes) ==
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ontology search form:
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* multi-ontology: http://dev.wormbase.org/db/ontology/search
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* go: http://dev.wormbase.org/db/ontology/gene
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* anatomy: http://dev.wormbase.org/db/ontology/anatomy
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* phenotype: http://dev.wormbase.org/db/misc/phenotype
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search resutls:
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search all ontologies for unc-26:
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http://dev.wormbase.org/db/ontology/search?ontologies=biological_process&ontologies=cellular_component&ontologies=molecular_function&ontologies=anatomy&ontologies=phenotype&query=unc-26&sort=alpha&filters=d&filters=s&Submit=Submit&.cgifields=with_annotations_only&.cgifields=filters&.cgifields=string_modifications&.cgifields=ontologies
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search all ontologies for egg:
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http://dev.wormbase.org/db/ontology/search?ontologies=biological_process&ontologies=cellular_component&ontologies=molecular_function&ontologies=anatomy&ontologies=phenotype&query=egg&sort=alpha&filters=d&filters=s&Submit=Submit&.cgifields=with_annotations_only&.cgifields=filters&.cgifields=string_modifications&.cgifields=ontologies
  
 
== 5. Open Table ==
 
== 5. Open Table ==

Latest revision as of 16:11, 16 June 2010

Agenda

1. Administrative Update (Todd; 5 minutes)

  • development deadline today (06/16)
  • some bitbucket tickets for OICR

2. API development update and goals (Xq & Norie, 15 minutes)

Discussion: how to make rich information easier to present --

  • global navigation bar
  • contextual nav bar
  • use 2 panel selector
  • use wireframing
  • other suggestions?

demos:

3. modENCODE liftover status (Xq and Todd; 5 minutes)

4. Ontology Search update (Norie; 10 minutes)

ontology search form:


search resutls:

search all ontologies for unc-26:

http://dev.wormbase.org/db/ontology/search?ontologies=biological_process&ontologies=cellular_component&ontologies=molecular_function&ontologies=anatomy&ontologies=phenotype&query=unc-26&sort=alpha&filters=d&filters=s&Submit=Submit&.cgifields=with_annotations_only&.cgifields=filters&.cgifields=string_modifications&.cgifields=ontologies

search all ontologies for egg:

http://dev.wormbase.org/db/ontology/search?ontologies=biological_process&ontologies=cellular_component&ontologies=molecular_function&ontologies=anatomy&ontologies=phenotype&query=egg&sort=alpha&filters=d&filters=s&Submit=Submit&.cgifields=with_annotations_only&.cgifields=filters&.cgifields=string_modifications&.cgifields=ontologies

5. Open Table

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