Difference between revisions of "WebDev 2010.05.12-Agenda and Minutes"
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* Discussed ontology search upgrade with Phenotype curators (Gary S. Jo wasn't there). | * Discussed ontology search upgrade with Phenotype curators (Gary S. Jo wasn't there). | ||
* They will evaluate results and are working on suggestions for the search form. | * They will evaluate results and are working on suggestions for the search form. | ||
+ | * Plans to add annotation searches for GO and AO, then bring in input from Raymond, Ranjana, Kimberly |
Revision as of 16:25, 12 May 2010
Contents
Agenda
1. Review last week's progress
1.1 GBrowse
- Abby's insights re: issues, correct
- XS made adjustments
- EST aligner issue discussion
2. WS214 Update status
- protein motifs -- break-up load_gff_patches steps
- mGENE entries -- checked out, OK
- build pipeline status -- to continues after WS214 completion
- GFF files -- add to check matrix
2.1 modENCODE
- XS working on this
- Use main GBrowse install
3. Discuss BioMart timeline
- AC ported functionality to Biomart server
- Dealing with boiler-plate issues
- Will build WS210 soon
4. Meetings
5. Search: API progress
DB connectivity: eg. CPU Usage: u129.24 s73.32 cu186.39 cs0 - .475% CPU load
6. Others
- Discussed ontology search upgrade with Phenotype curators (Gary S. Jo wasn't there).
- They will evaluate results and are working on suggestions for the search form.
- Plans to add annotation searches for GO and AO, then bring in input from Raymond, Ranjana, Kimberly