Difference between revisions of "WebDev 2009.11.18-Agenda and Minutes"
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* Running into GB issues with checking | * Running into GB issues with checking | ||
| − | * The data is in -- will check | + | * The data is in -- will check again later this week |
* Inform LS if lib problems are encountered | * Inform LS if lib problems are encountered | ||
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*seq/protein: GB2 module will work | *seq/protein: GB2 module will work | ||
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| + | * Work on incorporating an image map instead of just images. | ||
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| + | * Synteny Browser -- Analyzing for install. SM has put together an install package(?) | ||
| + | * Compatibility with GB2 at this point? Excercise caution in installing to avoid conflicts. | ||
== 7. Open Table == | == 7. Open Table == | ||
Latest revision as of 17:43, 18 November 2009
Contents
- 1 Agenda & Minutes
- 1.1 1. Administrative Update (Todd; 10 minutes)
- 1.2 2. Sign off on WS208 build (all; 5 minutes)
- 1.3 3. Paralog display review (Norie; 10 minutes)
- 1.4 4. modENCODE integration & track display (Abby; 5 minutes)
- 1.5 5. GB2 installation and debugging status (Abby & Xiaoqi; 10 minutes)
- 1.6 6. Inline images via GB2 (Xiaoqi; 5 minutes)
- 1.7 7. Open Table
Agenda & Minutes
1. Administrative Update (Todd; 10 minutes)
- Documentation re: Biomart; building server
- Dev deadline WS208
2. Sign off on WS208 build (all; 5 minutes)
- Running into GB issues with checking
- The data is in -- will check again later this week
- Inform LS if lib problems are encountered
3. Paralog display review (Norie; 10 minutes)
4. modENCODE integration & track display (Abby; 5 minutes)
Track sharing on GB1 from modENCODE: http://dev.wormbase.org/db/seq/gbrowse/c_elegans/
- Discussed the page above; running into GB1 lib problems?
- GB2 needs to be updated by Peter R.
- Some tracks need little ironing out
5. GB2 installation and debugging status (Abby & Xiaoqi; 10 minutes)
GB2 on dev: http://dev.wormbase.org/db/gb2/gbrowse/c_elegans/
- GB2 installed in the main dev site -- some troubleshooting
- Working with config files
- Plan: Migrate to GB2 for WS209
6. Inline images via GB2 (Xiaoqi; 5 minutes)
- gene/gene http://dev.wormbase.org:9004/db/gene/gene?name=WBGene00006763;class=Gene
- gene/variation http://dev.wormbase.org:9004/db/gene/variation?name=e1196;class=Variation
- gene/operon http://dev.wormbase.org:9004/db/gene/operon?name=CEOP2468;class=Operon
- seq/sequence http://dev.wormbase.org:9004/db/seq/sequence?name=JC8.10;class=Gene_name
- seq/protein: GB2 module will work
- Work on incorporating an image map instead of just images.
- Synteny Browser -- Analyzing for install. SM has put together an install package(?)
- Compatibility with GB2 at this point? Excercise caution in installing to avoid conflicts.
