Difference between revisions of "WebDev 2009.08.19-Agenda and Minutes"
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== 1. Administration Update (Todd; 10 minutes) == | == 1. Administration Update (Todd; 10 minutes) == | ||
| + | |||
| + | * Hardware status | ||
== 2. Discuss WS205 development status (5 minutes) == | == 2. Discuss WS205 development status (5 minutes) == | ||
| + | |||
| + | Norie away this week; WS205 development deadline today. | ||
== 3. Discuss modENCODE updates (Marc, Peter, Zheng, Todd; time as needed) == | == 3. Discuss modENCODE updates (Marc, Peter, Zheng, Todd; time as needed) == | ||
| + | |||
| + | Marc: | ||
| + | |||
| + | * Snyder data: releasing a new bolus of data | ||
| + | * Lieb data: nothing new; six more data sets | ||
| + | |||
| + | === Data Freeze === | ||
| + | |||
| + | * Analysis working group: data freeze on September 10th. | ||
| + | * Any modENCODE data at level 2 or level 3 will be considered | ||
| + | * Aim to have as many data freeze datasets mirrored from WormBase as possible | ||
| + | * Marked downloads directory for Level II/III data | ||
| + | |||
| + | * ''WormBase link to that data indicating modENCODE data sets (or a little page)'' | ||
| + | * ''For WS206: create freeze data sets and move to WormBase FTP site; Marc/Peter will let Todd know when ready'' | ||
| + | |||
| + | Peter | ||
| + | * Posted a few data sets - White and Celniker | ||
| + | * reolved bug in density plot of wiggle tracks | ||
== 4. Open Table == | == 4. Open Table == | ||
| + | |||
| + | * TH: GBrowse with NFS? | ||
| + | * LS: Works well with high performance system; however, session lock files don't lock correctly; problems providing round-robin services. | ||
| + | |||
| + | |||
| + | * TH: wiggle2gff3.pl - generate GFF2? | ||
| + | * LS: for each wiggle file, writes out a single line. Just needs a small change to allow GFF2 dumping. | ||
| + | |||
| + | GB2 | ||
| + | * LS New version with user accounts; OpenID login, sharing | ||
Latest revision as of 09:42, 26 August 2009
Contents
Agenda
1. Administration Update (Todd; 10 minutes)
- Hardware status
2. Discuss WS205 development status (5 minutes)
Norie away this week; WS205 development deadline today.
3. Discuss modENCODE updates (Marc, Peter, Zheng, Todd; time as needed)
Marc:
- Snyder data: releasing a new bolus of data
- Lieb data: nothing new; six more data sets
Data Freeze
- Analysis working group: data freeze on September 10th.
- Any modENCODE data at level 2 or level 3 will be considered
- Aim to have as many data freeze datasets mirrored from WormBase as possible
- Marked downloads directory for Level II/III data
- WormBase link to that data indicating modENCODE data sets (or a little page)
- For WS206: create freeze data sets and move to WormBase FTP site; Marc/Peter will let Todd know when ready
Peter
- Posted a few data sets - White and Celniker
- reolved bug in density plot of wiggle tracks
4. Open Table
- TH: GBrowse with NFS?
- LS: Works well with high performance system; however, session lock files don't lock correctly; problems providing round-robin services.
- TH: wiggle2gff3.pl - generate GFF2?
- LS: for each wiggle file, writes out a single line. Just needs a small change to allow GFF2 dumping.
GB2
- LS New version with user accounts; OpenID login, sharing
