WebDev 2009.06.16-Agenda and Minutes

2. Describe OICR migration progress (Todd, 10 minutes)

See:

• OICR-Configuring_the_development_machine
• Migrating_frozen_releases_to_OICR

Moved to: mod_perl2/apache2, GBrowse2

• localized libraries
• mod_perl2
• apache2
• GBrowse 2

LS:

Aggregator issues

 *  Aggregator has to be associated with the database 

gbrowse_img: tmpimages

 * in the main gbrowse.conf
 * apache config stanza
 * mapping from temporary URL space to physical space; adjust to do spacing

3. modENCODE Update (Marc, Peter, Zheng; 30 minutes)

Peter:

• Duplicated tracks - regular expression not capturing pattern appropriately
• Nicole working with Waterston on additional data sets

Marc:

Zheng: WormMart and modENCODE BioMart

BioMart will have central port that will point to development server

• TH: Where will the database live? Do we need to host?
• ZZ: Will discuss with Arek