Difference between revisions of "WS238 Models.wrm"
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=== Strain change - M.A.=== | === Strain change - M.A.=== | ||
− | Removal of the additional Unique tag in this branch | + | Removal of the additional Unique tag in this branch - ERROR fix |
<pre> | <pre> | ||
< Elevation UNIQUE Unique Float #Position_confidence // Elevation above sea level. | < Elevation UNIQUE Unique Float #Position_confidence // Elevation above sea level. |
Latest revision as of 09:58, 21 May 2013
Contents
General housekeeping
None
Curator Models proposals
Removal of Human_disease_relevance from ?Gene - Ranjana
< Human_disease_relevance ?Text #Evidenc // Ranjana [110601 pad]
Historical Gene additions - Chris
Caltech would like to only maintain primary curated data and update to the current WBGene when dumping data for upload
To accomplish this the following tag structure was added to multiple classes.
- ?Interaction
- ?Expr_pattern
- ?Antibody
- ?Transgene
- ?WBProcess
> Historical_gene ?Gene #Evidence
Other tag changes to accommodate the change
- #Interactor_info
> Inferred_automatically Text // a script has updated this connection
- ?Expr_pattern
< ?Expr_pattern Expression_of Gene ?Gene XREF Expr_pattern > ?Expr_pattern Expression_of Gene ?Gene XREF Expr_pattern #Evidence
- ?Antibody
< Gene ?Gene XREF Antibody > Gene ?Gene XREF Antibody #Evidence
- ?Transgene
< Promoter Driven_by_gene ?Gene XREF Drives_transgene // eventually change this tag to promoter_gene > Promoter Driven_by_gene ?Gene XREF Drives_transgene #Evidence // eventually change this tag to promoter_gene < Gene ?Gene XREF Transgene_product Text > Gene ?Gene XREF Transgene_product #Evidence < 3_UTR ?Gene > 3_UTR ?Gene #Evidence
- #Evidence hash
Addition to supplement historical gene.
> Remark ?Text
Strain change - M.A.
Removal of the additional Unique tag in this branch - ERROR fix
< Elevation UNIQUE Unique Float #Position_confidence // Elevation above sea level. > Elevation UNIQUE Float #Position_confidence // Elevation above sea level.
?Variation - M.A.
< Strain ?Strain XREF Variation > Strain ?Strain XREF Variation #Evidence
Feature/Variation - M.A./Gary W.
Removal of Text from this as it wasn't used/needed.
< Source_location UNIQUE Int UNIQUE ?Sequence UNIQUE Int UNIQUE Int UNIQUE Text #Evidence > Source_location UNIQUE Int UNIQUE ?Sequence UNIQUE Int UNIQUE Int UNIQUE #Evidence