WBConfCall 2024.03.21-Agenda and Minutes

Agenda

OMIM identifier and Disease Ontology (DO) file changes

• https://github.com/WormBase/website/issues/9444
• The Disease Ontology (DO) is planning to change the prefix on OMIM IDs from "OMIM:" to "MIM:", tentative release is late April.
• Need to update any WB pipelines accordingly that might be affected by this change. Apparently they will put out test files
• Affected: OMIM ids are in the manual curation at Caltech postgres database but don't show on website (check if dumped for data upload)
• Affected: OMIM ids coming from the "potential models" pipeline run at Hinxton for "Potential models disease display" on WB website
• DO test files are out:
  • MIM - https://github.com/DiseaseOntology/HumanDiseaseOntology/tree/mim_test_release
  • Acronym tags - https://github.com/DiseaseOntology/HumanDiseaseOntology/tree/acronym_test