WBConfCall 2023.11.16-Agenda and Minutes

Agenda/Minutes

AGR Paper - soft deadline for edits is this Friday, but some modifications can be made next week.

https://docs.google.com/document/d/1SC_zEBCes7l2ifqIEYljaMs7Orc3kklw

WB paper - deadline would be to early December. Focus is on the transition of data, resources and infrastructure from WormBase to the Alliance. Still more a planning document than a finished paper. Everyone should check the document and add things to be discussed, paragraphs or aspects to be added.

https://docs.google.com/document/d/1ecpa8MVYGYTvFvXRDMb0EZitaO3W7L2D2hdDCbH2Cv0/edit

New objects form

• We will need a replacement for the New object CGI

Javascript libraries provide by Google will be sunsetted, so there's a work on fixing for the Name server UI. There will be locks required in order for data created in the standard UI tom be loaded into Postgres. There will be a requirement to write code to send data from the curation side to Postgres.

Check following link for the soon to be deprecated libraries

https://developers.google.com/identity/sign-in/web/deprecation-and-sunset

Data freeze / Upload

• Up to Caltech, but be aware that SKD will be on vacation from Dec-4 till Jan-4. After that ~ 2 weeks required for Dec updates and prebuild so Main build most likely won't start by mid January.

January is fine for data upload to CalTech.

Apollo @ WormBase

• SKD -> Scott and WebTeam: Is it possible to run Apollo on top of our JBrowse? Can be internally only.

Scott will check the possibility of running a container with Appolo v2 on top of JBrowse.