Difference between revisions of "WBConfCall 2023.11.16-Agenda and Minutes"
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| − | AGR Paper | + | AGR Paper - soft deadline for edits is this Friday, but some modifications can be made next week. |
| + | https://docs.google.com/document/d/1SC_zEBCes7l2ifqIEYljaMs7Orc3kklw | ||
| + | |||
| + | WB paper - deadline would be to early December. Focus is on the transition of data, resources and infrastructure from WormBase to the Alliance. Still more a planning document than a finished paper. Everyone should check the document and add things to be discussed, paragraphs or aspects to be added. | ||
| − | |||
https://docs.google.com/document/d/1ecpa8MVYGYTvFvXRDMb0EZitaO3W7L2D2hdDCbH2Cv0/edit | https://docs.google.com/document/d/1ecpa8MVYGYTvFvXRDMb0EZitaO3W7L2D2hdDCbH2Cv0/edit | ||
| Line 11: | Line 13: | ||
=New objects form= | =New objects form= | ||
* We will need a replacement for the New object CGI | * We will need a replacement for the New object CGI | ||
| + | |||
| + | Javascript libraries provide by Google will be sunsetted, so there's a work on fixing for the Name server UI. There will be locks required in order for data created in the standard UI tom be loaded into Postgres. There will be a requirement to write code to send data from the curation side to Postgres. | ||
| + | |||
https://developers.google.com/identity/sign-in/web/deprecation-and-sunset | https://developers.google.com/identity/sign-in/web/deprecation-and-sunset | ||
| Line 17: | Line 22: | ||
=Data freeze / Upload= | =Data freeze / Upload= | ||
* Up to Caltech, but be aware that SKD will be on vacation from Dec-4 till Jan-4. After that ~ 2 weeks required for Dec updates and prebuild so Main build most likely won't start by mid January. | * Up to Caltech, but be aware that SKD will be on vacation from Dec-4 till Jan-4. After that ~ 2 weeks required for Dec updates and prebuild so Main build most likely won't start by mid January. | ||
| + | |||
| + | |||
| + | January is fine for data upload to CalTech. | ||
| + | |||
=Apollo @ WormBase= | =Apollo @ WormBase= | ||
* SKD -> Scott and WebTeam: Is it possible to run Apollo on top of our JBrowse? Can be internally only. | * SKD -> Scott and WebTeam: Is it possible to run Apollo on top of our JBrowse? Can be internally only. | ||
| + | |||
| + | Scott will check the possibility of running a container with Appolo v2 on top of JBrowse. | ||
Revision as of 17:43, 16 November 2023
Agenda/Minutes
AGR Paper - soft deadline for edits is this Friday, but some modifications can be made next week.
https://docs.google.com/document/d/1SC_zEBCes7l2ifqIEYljaMs7Orc3kklw
WB paper - deadline would be to early December. Focus is on the transition of data, resources and infrastructure from WormBase to the Alliance. Still more a planning document than a finished paper. Everyone should check the document and add things to be discussed, paragraphs or aspects to be added.
https://docs.google.com/document/d/1ecpa8MVYGYTvFvXRDMb0EZitaO3W7L2D2hdDCbH2Cv0/edit
New objects form
- We will need a replacement for the New object CGI
Javascript libraries provide by Google will be sunsetted, so there's a work on fixing for the Name server UI. There will be locks required in order for data created in the standard UI tom be loaded into Postgres. There will be a requirement to write code to send data from the curation side to Postgres.
https://developers.google.com/identity/sign-in/web/deprecation-and-sunset
Data freeze / Upload
- Up to Caltech, but be aware that SKD will be on vacation from Dec-4 till Jan-4. After that ~ 2 weeks required for Dec updates and prebuild so Main build most likely won't start by mid January.
January is fine for data upload to CalTech.
Apollo @ WormBase
- SKD -> Scott and WebTeam: Is it possible to run Apollo on top of our JBrowse? Can be internally only.
Scott will check the possibility of running a container with Appolo v2 on top of JBrowse.
