Difference between revisions of "WBConfCall 2023.09.21–Agenda and Minutes"
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===Help Desk=== | ===Help Desk=== | ||
* https://github.com/WormBase/website/issues/9322 | * https://github.com/WormBase/website/issues/9322 | ||
| + | ** Paulo will take a look | ||
===Sequence feature curation=== | ===Sequence feature curation=== | ||
Revision as of 15:33, 21 September 2023
Contents
Agenda
Help Desk
- https://github.com/WormBase/website/issues/9322
- Paulo will take a look
Sequence feature curation
- Gary Williams was curating sequence features for expression annotations, for example enhancer regions sufficient to drive expression in a certain tissue.
- We are not actively curating this at the moment but there are a couple of annotations that need Sequence Feature objects -found while cleaning up data for Alliance.
- In the short term there would be need to curate only Sequence Feature objects for these 2 existing papers, but to do so would need access to the F map?
- Example of a sequence feature connected to expression: https://wormbase.org/species/all/expr_pattern/Expr11278#02--10
ftp site synchronization
- GO is waiting for the WB GAF to complete their September release
- Are there still problems with synchronizing the Hinxton and WB ftp site?
- If so, can we temporarily point GO to the Hinxton ftp site or will they have the same problem?
- https://github.com/WormBase/website/issues/9319
Caltech-Nameserver options
- How should Variation and Strains be created by Caltech curations, what options are possible.
