Difference between revisions of "WBConfCall 2023.09.21–Agenda and Minutes"

Revision as of 18:09, 20 September 2023

Gary Williams was curating sequence features for expression annotations, for example enhancer regions sufficient to drive expression in a certain tissue.
We are not actively curating this at the moment but there are a couple of annotations that need Sequence Feature objects -found while cleaning up data for Alliance.
In the short term there would be need to curate only Sequence Feature objects for these 2 existing papers, but to do so would need access to the F map?
Example of a sequence feature connected to expression: https://wormbase.org/species/all/expr_pattern/Expr11278#02--10

GO is waiting for the WB GAF to complete their September release
Are there still problems with synchronizing the Hinxton and WB ftp site?
- If so, can we temporarily point GO to the Hinxton ftp site or will they have the same problem?
https://github.com/WormBase/website/issues/9319

How should Variation and Strains be created by Caltech curations, what options are possible.

@@ Line 1: / Line 1: @@
 ==Agenda==
+===Help Desk===
+* Put list of tickets here with link to them.
 ===Sequence feature curation===
 * Gary Williams was curating sequence features for expression annotations, for example enhancer regions sufficient to drive expression in a certain tissue.
@@ Line 11: / Line 15: @@
 ** If so, can we temporarily point GO to the Hinxton ftp site or will they have the same problem?
 * https://github.com/WormBase/website/issues/9319
+===Caltech-Nameserver options===
+* How should Variation and Strains be created by Caltech curations, what options are possible.
 ==Minutes==