Difference between revisions of "WBConfCall 2023.04.06-Agenda and Minutes"
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*** The preferred and recommended way to do this would be via an assumed role, not dedicated AWS CLI credentials. | *** The preferred and recommended way to do this would be via an assumed role, not dedicated AWS CLI credentials. | ||
*** I think you mean instance? AMIs are images of instances. IMHO a stand-alone instance is overkill, and already have instances available to run a cron. | *** I think you mean instance? AMIs are images of instances. IMHO a stand-alone instance is overkill, and already have instances available to run a cron. | ||
+ | ** Juancarlos | ||
+ | *** That's great. I don't know much about AWS. If you're able to set up a cronjob to daily | ||
+ | **** java -cp wb-names-export.jar clojure.main -m wormbase.names.export gene genes.csv | ||
+ | *** And put the output genes.csv somewhere web accessible, I think that's all Caltech would need. | ||
+ | *** I don't know much more about it, other than Matt Russell told me to run that (we went back and forth a bunch of times before it worked). | ||
+ | *** Here's a copy of the .jar file | ||
+ | **** https://tazendra.caltech.edu/~azurebrd/var/work/todd/wb-names-export.jar |
Revision as of 05:50, 6 April 2023
Agenda and Minutes
Help Desk
- Please double-check any tickets assigned to you and close, if you can
- Check unassigned tickets that still need a claimant, if possible, or perhaps a priority rating?
IWM Meeting
- Planning for the WB workshop
- Need some separate meetings for this?
- TH: who’s attending? Do we have travel funds available?
New items
- WB needs Genes from nameserver, which is on AWS, so need creds or AMI ?
- TH
- I will give a post-mortem of the recent credential leak at the next conference call.
- The preferred and recommended way to do this would be via an assumed role, not dedicated AWS CLI credentials.
- I think you mean instance? AMIs are images of instances. IMHO a stand-alone instance is overkill, and already have instances available to run a cron.
- Juancarlos
- That's great. I don't know much about AWS. If you're able to set up a cronjob to daily
- java -cp wb-names-export.jar clojure.main -m wormbase.names.export gene genes.csv
- And put the output genes.csv somewhere web accessible, I think that's all Caltech would need.
- I don't know much more about it, other than Matt Russell told me to run that (we went back and forth a bunch of times before it worked).
- Here's a copy of the .jar file
- That's great. I don't know much about AWS. If you're able to set up a cronjob to daily
- TH