WBConfCall 2022.09.01-Agenda and Minutes

Help desk issues

• Fosmid and clone availability #8649
  • No availability seems to be the word- most replies were negative
  • Urgently need to update pages https://wiki.wormbase.org/index.php/Fosmids and https://wiki.wormbase.org/index.php/Cosmids/YACs to reflect real lack of availability

• https://github.com/WormBase/website/issues/8761
• https://github.com/WormBase/website/issues/8760
• https://github.com/WormBase/website/issues/8759

• Check if the reply to #8755 was sent to the user via email

• check https://github.com/WormBase/website/issues/8756 (for webteam)

Agenda

• Grant progress & questions

• Data/classes already harmonized in Alliance

https://docs.google.com/spreadsheets/d/1ZsxGlMHvWxPjRwI2jtIys-sQgZY602cf/edit#gid=284571688 - please all refresh/check

• New RNA-Seq processing pipeline towards Y4/Y5 of the grant? - okay, mention it

• Data on productivity over time (which releases to count, which data)?

• Do we need to add progress report? No - we don't think so, but we can double-check with NIH support? And we can add some progress data in the text

• Do references add to page count? No - we don't think so

• Model single-cell data, and Highlight genes, markers and reagents for that cell/type
  • Venn diagrams? Fold changes?
  • Need to modify the schema of expression_cluster - then calculate the numbers