Difference between revisions of "WBConfCall 2021.11.18-Agenda and Minutes"

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= Helpdesk =
 
= Helpdesk =
 
* C. elegans codon usage table? [https://github.com/WormBase/website/issues/8459 #8459]
 
* C. elegans codon usage table? [https://github.com/WormBase/website/issues/8459 #8459]
 +
  web resources
 +
  1. C. elegans II. 2nd edition - Appendix 3 Codon Usage in C. elegans (https://www.ncbi.nlm.nih.gov/books/NBK20194/)
 +
  2. https://www.kazusa.or.jp/codon/cgi-bin/showcodon.cgi?species=6239
 
* Annotating a whole genome sequence of Parelaphostrongylus tenuis [https://github.com/WormBase/website/issues/8455 #8455]
 
* Annotating a whole genome sequence of Parelaphostrongylus tenuis [https://github.com/WormBase/website/issues/8455 #8455]
 
* the meaning of "PRJNA..." and "PRJEB..." [https://github.com/WormBase/website/issues/8458 #8458]
 
* the meaning of "PRJNA..." and "PRJEB..." [https://github.com/WormBase/website/issues/8458 #8458]
 
* How can I get the size of thousands of genes and their the largest CDSs? [https://github.com/WormBase/website/issues/8460 #8460]
 
* How can I get the size of thousands of genes and their the largest CDSs? [https://github.com/WormBase/website/issues/8460 #8460]

Revision as of 00:53, 18 November 2021

Agenda and Minutes

Check status of GO_annotation patch file for WS283

  • Upstream changes to evidence codes resulted in missing evidence for IEA annotations imported from UniProt
  • Patch .ace file produced with corrected evidence
  • Status of WS283 data?

Helpdesk

  • C. elegans codon usage table? #8459
 web resources
 1. C. elegans II. 2nd edition - Appendix 3 Codon Usage in C. elegans (https://www.ncbi.nlm.nih.gov/books/NBK20194/)
 2. https://www.kazusa.or.jp/codon/cgi-bin/showcodon.cgi?species=6239
  • Annotating a whole genome sequence of Parelaphostrongylus tenuis #8455
  • the meaning of "PRJNA..." and "PRJEB..." #8458
  • How can I get the size of thousands of genes and their the largest CDSs? #8460