Revision as of 15:54, 20 May 2021

Help Desk

Open tickets:

https://github.com/WormBase/website/issues/8228
1. file at this location (ftp://ftp.wormbase.org/pub/wormbase/releases/WS253/MULTI_SPECIES/hub/elegans/elegans_genes_WS253.bb) which contained each of the transcripts with exon start positions and lengths. not there now. user was Updating transcript bed file for CeNDR from WS253 to WS276
2. Todd says we're not maintaining links to historical files. User was sent Michael Paulini's link. ftp.ebi.ac.uk/pub/databases/wormbase/releases/WS253/MULTI_SPECIES/hub/elegans/elegans_genes_WS253.bb

Caltech:

Hinxton:

Expanded collection of C. elegans comparator genomes by adding a chromosome-scale draft C. bovis assembly {PMID:32109387}, and nine further draft assemblies of newly described Caenorhabditis species {PMID:1007946}
Replaced two C. remanei strains (PX356 and PX439) with animproved chromosome-scale assembly of C. remanei PX506 {PMID:32111628}.

Looking to submit early September with the other AGR Mods.
Draft layout here: https://docs.google.com/document/d/1zBaGNtByCNJC8CxheKW_ewja5N1iyMzDBCu_JcYFXBE/edit?usp=sharing
Please add comments or additions to any of the Topic areas already listed.

@@ Line 3: / Line 3: @@
 # https://github.com/WormBase/website/issues/8228
 ##  file at this location (ftp://ftp.wormbase.org/pub/wormbase/releases/WS253/MULTI_SPECIES/hub/elegans/elegans_genes_WS253.bb) which contained each of the transcripts with exon start positions and lengths.  not there now. user was   Updating transcript bed file for CeNDR from WS253 to WS276
+## Todd says we're not maintaining links to historical files.  User was sent Michael Paulini's link.  ftp.ebi.ac.uk/pub/databases/wormbase/releases/WS253/MULTI_SPECIES/hub/elegans/elegans_genes_WS253.bb
 = Agenda and Minutes=