Difference between revisions of "WBConfCall 2021.02.04-Agenda and Minutes"

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= Agenda and Minutes=
 
= Agenda and Minutes=
* GAF files. Are GAF files C. elegans specific? We have 39 expression annotations to other species (remanei, brenneri, brugia). ok to leave them out? If not, make sure that those Expression_objects don't make it to the GAF.
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== GAF files ==
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* Are GAF files C. elegans specific? We have 39 expression annotations to other species (remanei, brenneri, brugia). ok to leave them out? If not, make sure that those Expression_objects don't make it to the GAF.
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* Chris has written up a Wiki page to point to GAF specifications, describe the format details, and suggest a new header for each GAF in our FTP "ONTOLOGY" directory
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** Current "ONTOLOGY" directory on FTP: ftp://ftp.wormbase.org/pub/wormbase/releases/current-production-release/ONTOLOGY/
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** New Wiki page: https://wiki.wormbase.org/index.php/WormBase_gene_association_file
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** We would like to push ahead with modifying the headers of these association files

Revision as of 20:31, 3 February 2021

Help Desk

Agenda and Minutes

GAF files