Difference between revisions of "WBConfCall 2020.12.17-Agenda and Minutes"
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= Minutes = | = Minutes = | ||
* CeNGEN | * CeNGEN | ||
− | ** Will talk in January for integration into WormBase: who should be on that call? Eduardo | + | ** Will talk in January for integration into WormBase: who should be on that call? |
+ | *** Eduardo et al. | ||
** Eduardo has several ideas about how to integrate and display | ** Eduardo has several ideas about how to integrate and display | ||
*** Has slides (for Alliance) with a breakdown of technology over time, species represented (mostly human and mouse) | *** Has slides (for Alliance) with a breakdown of technology over time, species represented (mostly human and mouse) | ||
*** First C. elegans dataset in 2017; another in 2019 with re-annotation of 2017 dataset | *** First C. elegans dataset in 2017; another in 2019 with re-annotation of 2017 dataset | ||
+ | *** scRNA-seq data sets are in a big sparse matrix | ||
+ | *** Data in raw FASTQ file --> read alignments --> unfiltered matrix --> barcode filtering --> filtered matrix |
Revision as of 16:45, 17 December 2020
Help Desk
Agenda
- WormBase Social Hour?
- WormBase list of data types to bring into the Alliance
- CeNGEN - C. elegans Neuronal Gene Expression Network
Minutes
- CeNGEN
- Will talk in January for integration into WormBase: who should be on that call?
- Eduardo et al.
- Eduardo has several ideas about how to integrate and display
- Has slides (for Alliance) with a breakdown of technology over time, species represented (mostly human and mouse)
- First C. elegans dataset in 2017; another in 2019 with re-annotation of 2017 dataset
- scRNA-seq data sets are in a big sparse matrix
- Data in raw FASTQ file --> read alignments --> unfiltered matrix --> barcode filtering --> filtered matrix
- Will talk in January for integration into WormBase: who should be on that call?