WBConfCall 2020.05.07-Agenda and Minutes
Note: this page is a copy of WBConfCall_2020.05.06-Agenda_and_Minutes; I got the date wrong when I created the page!
Staff changes at Hinxton
Welcom Mark QT!
Model changes for WS278
Disease data handling
Ranjana proposed for WS278
Model has been incorporated: commit https://github.com/WormBase/wormbase-pipeline/commit/7b744319bd507b527d893f25e6a6dd5ac1766e9b
I had to add a Disease_modifier_gene ?Gene XREF Modifies_disease tag as missed a note on the wiki.
Could you check the model again Ranjana.
ECO code data model
Kimberly proposed for WS278
Ranjana had an additional Disease tag for this:
Evidence_code ECO_term ?ECO_term //new tag GO_code ?GO_code //old tag, but add “GO_code” in front of ?GO_code
Model has been incorporated: commit:https://github.com/WormBase/wormbase-pipeline/commit/b8e089f4ba148a2f006451c74b15ee0083304d48
WS278 build schedule
Suggestion: be up front on twitter, website and wiki and follow the more flexible schedule.
Set up a slack channel to discuss this #build268.
- HX preference would be to push the WS278 release schedule back by 2 weeks
Adjusted Schedule to what was posted in the slack channel:
29th May - Models freeze 19th June - Upload 22nd June-17th July - ACeDB production 20th-24th July - Datomic migration 24th July End Hinxton release and final handover to OICR
15th May - Models freeze 5th June - Upload 8th June-3rd July - ACeDB production <!!!!!!EBI Farm move 22nd June - 3rd July!!!!!!!> 6th-10th July - Datomic migration 10th July End Hinxton release and final handover to OICR
#7663 Homology group Overview Widget Paul Davis commented and reassigned to Michael P. who has also commented.
#7637 Making retractions more visible Kimberly Van Auken already commented.
Nice note about one recently closed issue
New build procedure for JBrowse pays off.