Difference between revisions of "WBConfCall 2020.03.05-Agenda and Minutes"
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** Could this be added as a GO MF (GO:0050207)? | ** Could this be added as a GO MF (GO:0050207)? | ||
** Has anyone replied to Montserrat Elías regarding naming of same gene, Y53C10A.5? | ** Has anyone replied to Montserrat Elías regarding naming of same gene, Y53C10A.5? | ||
− | |||
== Rearrangement IDs == | == Rearrangement IDs == | ||
* From thread on Slack, "general" channel | * From thread on Slack, "general" channel | ||
* Karen asked about getting WB IDs for rearrangements (they currently do not get serial IDs) | * Karen asked about getting WB IDs for rearrangements (they currently do not get serial IDs) | ||
− | |||
== Nameserver-to-Caltech info transmission == | == Nameserver-to-Caltech info transmission == | ||
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* Currently relies on a nightly cronjob to dump GeneACE to Caltech Postgres database | * Currently relies on a nightly cronjob to dump GeneACE to Caltech Postgres database | ||
* Caltech can create a local CGI to immediately update Postgres/OA with new terms before nightly dump occurs | * Caltech can create a local CGI to immediately update Postgres/OA with new terms before nightly dump occurs | ||
+ | * Is there an effective mechanism to make updates to Caltech Postgres/OA as immediately as possible? | ||
− | ==Disease info changes in 6 classes== | + | == Disease info changes in 6 classes == |
*I propose making these changes for WS278, gives us more time to revisit/change dumpers, and test the data here at Caltech (Ranjana) | *I propose making these changes for WS278, gives us more time to revisit/change dumpers, and test the data here at Caltech (Ranjana) | ||
*If we want to go ahead with the new ?Genotype class, that's separate and I'm fine with that (Ranjana) | *If we want to go ahead with the new ?Genotype class, that's separate and I'm fine with that (Ranjana) | ||
+ | |||
+ | == Single cell expression tool == | ||
+ | * Eduardo is looking for feedback on his tool to query C. elegans single cell expression |
Revision as of 00:59, 4 March 2020
Contents
Agenda
Help Desk
- Has anyone replied to Padhu Padmanabhan (email Feb 4)?
- Asked about indicating Y53C10A.5 as having plasmanylethanolamine delta-1-desaturase (EC 1.14.99.19) activity
- Could this be added as a GO MF (GO:0050207)?
- Has anyone replied to Montserrat Elías regarding naming of same gene, Y53C10A.5?
Rearrangement IDs
- From thread on Slack, "general" channel
- Karen asked about getting WB IDs for rearrangements (they currently do not get serial IDs)
Nameserver-to-Caltech info transmission
- Caltech curators would like quick turn around when requesting names/IDs
- Currently relies on a nightly cronjob to dump GeneACE to Caltech Postgres database
- Caltech can create a local CGI to immediately update Postgres/OA with new terms before nightly dump occurs
- Is there an effective mechanism to make updates to Caltech Postgres/OA as immediately as possible?
Disease info changes in 6 classes
- I propose making these changes for WS278, gives us more time to revisit/change dumpers, and test the data here at Caltech (Ranjana)
- If we want to go ahead with the new ?Genotype class, that's separate and I'm fine with that (Ranjana)
Single cell expression tool
- Eduardo is looking for feedback on his tool to query C. elegans single cell expression