WBConfCall 2020.02.20-Agenda and Minutes
From WormBaseWiki
Contents
Agenda
Project Meeting
- Plan is to have Caltech host
- Doodle poll for April and May dates
- How many days do we need?
- Will also host a virtual SAB meeting
- AI: Start a draft agenda - flesh out by mid-March
Help Desk
- Estimate of number of C. elegans genes with no function
- What criteria would give us a reasonable estimate of that number?
- No phenotype, interaction, GO, expression? Anything else?
- Answering this kind of question requires us to have "complete" curation on certain data types. Are we going to keep this goal with the move into AGR? If "complete" on all data types is not a practical goal, which data types should be targeted to "complete"?
- What criteria would give us a reasonable estimate of that number?
- I was directed here from a link on the CGC
- Do we need to take any action to fix the broken Strain links from CGC to WormBase? (notify CGC or point the old URLs to the current strain URLs ...)
- This may be an isolated case. KVA contacted the CGC to let them know and ask if they need any help from us.
- WormMine Questions
- Anything more to follow up with here?
Website Widgets
- Any specific issues to discuss here?
- Widgets Protein page motif_details and overview widget, Go page Associations widget, and Gene page Homology widget
Alliance
- orthology updates - downstream effects
- Valerio will present on the WB literature acquisition and flagging pipelines on Tuesday, the 25th, at the Alliance Literature Working Group
?Genotype class
- Genotype Wiki page updated
- Have removed strain associations, maternal/paternal genotypes and zygosity from proposal for now