Difference between revisions of "WBConfCall 2020.02.06-Agenda and Minutes"
From WormBaseWiki
Jump to navigationJump to search| Line 23: | Line 23: | ||
= Minutes = | = Minutes = | ||
| − | == | + | == CalTech F2F meeting == |
| − | * | + | * Need PS for this, but not on the call |
| + | |||
| + | SAB: | ||
| + | *Can teleconference for the grant and NIH | ||
| + | |||
| + | F2F: | ||
| + | * What do people want? Project meeting? | ||
| + | * AceDB datomic? - what do we want to do. | ||
| + | |||
| + | |||
| + | |||
| + | == RNASeq meta data == | ||
| + | * Mentioned in the DQM | ||
| + | * currently curated at both HX and CalTech | ||
| + | ** Need to have a working procedure. | ||
| + | ** Been through the whole table...almost have finalised schema - would be good to have the schema in the database | ||
| + | ** Deadline for V3 was last friday, but poss can add data in. | ||
| + | ** Wen will comunicate with Hinxton. | ||
| + | |||
| + | == Alaska == | ||
| + | * Project to J & Raymond working with Post Doc and UG student | ||
| + | * Post Doc moved on not sure of student support | ||
| + | * Not in state where WB can take it on? | ||
| + | * WB only getting bugs as Joseph put help@wormbase.org as contact | ||
| + | * Premature to release and link to WB. | ||
| + | |||
| + | == RNA resources == | ||
| + | Wen - added, not confident about answering HD issues. | ||
| + | Chris will be giving a talk so background would be good. | ||
| + | |||
| + | HelpDesk questions should be answering by HX | ||
| + | * Onsite meetings - Would be good to have knowledge provided to CalTech | ||
| + | * Some summarisation in the grant application. | ||
| + | * HX could create a tutorial with help from others about data mining etc. | ||
| + | * Persue feedback to drill down | ||
| + | * linking data types to references | ||
| + | * Follow with a blog | ||
| + | |||
| + | == Open Floor == | ||
| + | * | ||
Revision as of 17:02, 6 February 2020
Contents
Agenda
Advisory Board Meeting
any dates/etc.?
RNASeq Meta-Data for AGR
what are the plans?
- The EWG (high-throughput) has been discussing what kind of meta-data information to include for AGR 3.0. We will probably finalize the information table next Monday. Here is the meta-data table that we are looking at:
https://docs.google.com/spreadsheets/d/1H7bzMJVj6KevZHDGp61tCCdRo8ubHHzEKWaYu_7gn-w/edit#gid=0
Help Desk
- Alaska memory bug?
Is there a link from WormBase to Alaska, and an announcement about its function?
WormBase resources for non-coding RNA
- Is it possible that Hinxton gives Caltech a tutorial on what kind of curation and resources that WormBase has for non-coding RNA? It will be very helpful for us to answer help-desk questions and future on-site tutorials. A zoom meeting will be good.
Minutes
CalTech F2F meeting
- Need PS for this, but not on the call
SAB:
- Can teleconference for the grant and NIH
F2F:
- What do people want? Project meeting?
- AceDB datomic? - what do we want to do.
RNASeq meta data
- Mentioned in the DQM
- currently curated at both HX and CalTech
- Need to have a working procedure.
- Been through the whole table...almost have finalised schema - would be good to have the schema in the database
- Deadline for V3 was last friday, but poss can add data in.
- Wen will comunicate with Hinxton.
Alaska
- Project to J & Raymond working with Post Doc and UG student
- Post Doc moved on not sure of student support
- Not in state where WB can take it on?
- WB only getting bugs as Joseph put help@wormbase.org as contact
- Premature to release and link to WB.
RNA resources
Wen - added, not confident about answering HD issues. Chris will be giving a talk so background would be good.
HelpDesk questions should be answering by HX
- Onsite meetings - Would be good to have knowledge provided to CalTech
- Some summarisation in the grant application.
- HX could create a tutorial with help from others about data mining etc.
- Persue feedback to drill down
- linking data types to references
- Follow with a blog
