WBConfCall 2018.03.15-Agenda and Minutes

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Importing Undiagnosed Diseases Network (UDN) worm data into WormBase

  • PI in contact: Andy Golden; This is pre-publication data, but my understanding is that we are taking this in, so this is one of the exceptions
  • Initially thought it would be textual data that would go into disease model curation, but really involves other data types such as Variation, Strain, Phenotype, Sequence change etc.
  • Example, for amino acid sequence change (from Kevin): include the UniProt protein entry that they used, and track this forward with future versions of the assembly and gene set
  • So looks like we want to integrate the data across these datatypes, in a more organic way, not just textual information, so we will need to co-ordinate between the different data curators
  • When the data is eventually published we will need to make sure everything matches up (something that Chris G. was concerned about)