Difference between revisions of "WBConfCall 2018.03.15-Agenda and Minutes"
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==Importing Undiagnosed Diseases Network (UDN) worm data into WormBase== | ==Importing Undiagnosed Diseases Network (UDN) worm data into WormBase== | ||
* PI in contact: Andy Golden; This is pre-publication data, but my understanding is that we are taking this in, so this is one of the exceptions | * PI in contact: Andy Golden; This is pre-publication data, but my understanding is that we are taking this in, so this is one of the exceptions | ||
| − | *Initially thought it would be textual data that would go into disease model curation, but really involves other data types such as Variation, Strain, Phenotype, Sequence | + | *Initially thought it would be textual data that would go into disease model curation, but really involves other data types such as Variation, Strain, Phenotype, Sequence change etc. |
| − | * Example, for | + | * Example, for amino acid sequence change (from Kevin): include the UniProt protein entry that they used, and track this forward with future versions of the assembly and gene set |
| − | *So looks like we want to integrate the data across these datatypes, in a more organic way, not just textual information, so | + | *So looks like we want to integrate the data across these datatypes, in a more organic way, not just textual information, so we will need to co-ordinate between the different data curators |
| + | *When the data is eventually published we will need to make sure everything matches up (something that Chris G. was concerned about) | ||
Revision as of 22:14, 14 March 2018
Agenda
Importing Undiagnosed Diseases Network (UDN) worm data into WormBase
- PI in contact: Andy Golden; This is pre-publication data, but my understanding is that we are taking this in, so this is one of the exceptions
- Initially thought it would be textual data that would go into disease model curation, but really involves other data types such as Variation, Strain, Phenotype, Sequence change etc.
- Example, for amino acid sequence change (from Kevin): include the UniProt protein entry that they used, and track this forward with future versions of the assembly and gene set
- So looks like we want to integrate the data across these datatypes, in a more organic way, not just textual information, so we will need to co-ordinate between the different data curators
- When the data is eventually published we will need to make sure everything matches up (something that Chris G. was concerned about)
