Difference between revisions of "WBConfCall 2018.02.15-Agenda and Minutes"

From WormBaseWiki
Jump to navigationJump to search
Line 2: Line 2:
  
 
== JBrowse update ==
 
== JBrowse update ==
* New EST glyph (grouping paired reads.  [http://staging.wormbase.org/tools/genome/jbrowse-simple/full.html?data=data%2Fc_elegans_PRJNA13758&loc=III%3A5551561..5572000&tracks=Curated_Genes%2CESTs%20(best) Example]
+
* New EST glyph (grouping paired reads.  [http://staging.wormbase.org/tools/genome/jbrowse-simple/full.html?data=data%2Fc_elegans_PRJNA13758&loc=III%3A5551561..5572000&tracks=Curated_Genes%2CESTs%20(best) Example])
 
* New CDS/Frame usage glyph along with color coded translations in the reference sequence. [http://staging.wormbase.org/tools/genome/jbrowse-simple/full.html?data=data%2Fc_elegans_PRJNA13758&loc=III%3A5675875..5675925&tracks=Frame%20usage%20(CDS)%2CDNA Example]
 
* New CDS/Frame usage glyph along with color coded translations in the reference sequence. [http://staging.wormbase.org/tools/genome/jbrowse-simple/full.html?data=data%2Fc_elegans_PRJNA13758&loc=III%3A5675875..5675925&tracks=Frame%20usage%20(CDS)%2CDNA Example]
 
* External sources section with CeNDR variation data and CRISPR sgRNA predictions from the Moerman Lab
 
* External sources section with CeNDR variation data and CRISPR sgRNA predictions from the Moerman Lab

Revision as of 16:07, 14 February 2018

Agenda

JBrowse update

  • New EST glyph (grouping paired reads. Example)
  • New CDS/Frame usage glyph along with color coded translations in the reference sequence. Example
  • External sources section with CeNDR variation data and CRISPR sgRNA predictions from the Moerman Lab

Open Tickets

Minutes