Difference between revisions of "WBConfCall 2018.02.15-Agenda and Minutes"

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= Agenda =
 
= Agenda =
 +
excused: Karen
 +
 +
== WS264 Status ==
 +
Heads-up:
 +
* Incorporation of T. muris and pipeline code updates have caused delay
 +
* Due: 23rd Feb (Including datomic import)
 +
 +
== WS265 Dates ==
 +
* 2nd March Models release
 +
* 23rd March Upload
 +
* 27th April Release
  
 
== JBrowse update ==
 
== JBrowse update ==
**New EST glyph (grouping paired reads.  [http://staging.wormbase.org/tools/genome/jbrowse-simple/full.html?data=data%2Fc_elegans_PRJNA13758&loc=III%3A5551561..5572000&tracks=Curated_Genes%2CESTs%20(best) Example]
+
* New EST glyph (grouping paired reads.  [http://staging.wormbase.org/tools/genome/jbrowse-simple/full.html?data=data%2Fc_elegans_PRJNA13758&loc=III%3A5551561..5572000&tracks=Curated_Genes%2CESTs%20(best) Example])
**New CDS/Frame usage glyph along with color coded translations in the reference sequence. [http://staging.wormbase.org/tools/genome/jbrowse-simple/full.html?data=data%2Fc_elegans_PRJNA13758&loc=III%3A5675875..5675925&tracks=Frame%20usage%20(CDS)%2CDNA Example]
+
* New CDS/Frame usage glyph along with color coded translations in the reference sequence. [http://staging.wormbase.org/tools/genome/jbrowse-simple/full.html?data=data%2Fc_elegans_PRJNA13758&loc=III%3A5675875..5675925&tracks=Frame%20usage%20(CDS)%2CDNA Example]
**External sources section with CeNDR variation data and CRISPR sgRNA predictions from the Moerman Lab
+
* External sources section with CeNDR variation data and CRISPR sgRNA predictions from the Moerman Lab
  
 
== Open Tickets ==
 
== Open Tickets ==
* [https://github.com/WormBase/website/issues/6178 protein domain rendering] - OICR
 
 
* [https://github.com/WormBase/website/issues/6186 paper curation form] - CalTech
 
* [https://github.com/WormBase/website/issues/6186 paper curation form] - CalTech
 +
* Data Management Plan
  
 
= Minutes =
 
= Minutes =
 +
== Tickets ==
 +
* Data Management Plan question needs more feedback
 +
 +
== WS264 ==
 +
* delayed due to additional
 +
 +
== WS265 ==
 +
* planned dates ok with CalTech
 +
 +
== ABM 2018 ==
 +
* potentially early July 2018
 +
* Toronto?
 +
* 2 days: 1x pre-meeting 1x SAB
 +
* Todd will setup a doodle poll
 +
 +
== Grant ==
 +
* reviewed next week
 +
* results in two weeks?
 +
* should know the results for the ABM
 +
 +
== JBrowse ==
 +
* Scott showed the new features and would like to hear more feedback
 +
 +
== AGR SAB ==
 +
* Paul can raise questions at the SAB, so please send them to him

Latest revision as of 16:56, 15 February 2018

Agenda

excused: Karen

WS264 Status

Heads-up:

  • Incorporation of T. muris and pipeline code updates have caused delay
  • Due: 23rd Feb (Including datomic import)

WS265 Dates

  • 2nd March Models release
  • 23rd March Upload
  • 27th April Release

JBrowse update

  • New EST glyph (grouping paired reads. Example)
  • New CDS/Frame usage glyph along with color coded translations in the reference sequence. Example
  • External sources section with CeNDR variation data and CRISPR sgRNA predictions from the Moerman Lab

Open Tickets

Minutes

Tickets

  • Data Management Plan question needs more feedback

WS264

  • delayed due to additional

WS265

  • planned dates ok with CalTech

ABM 2018

  • potentially early July 2018
  • Toronto?
  • 2 days: 1x pre-meeting 1x SAB
  • Todd will setup a doodle poll

Grant

  • reviewed next week
  • results in two weeks?
  • should know the results for the ABM

JBrowse

  • Scott showed the new features and would like to hear more feedback

AGR SAB

  • Paul can raise questions at the SAB, so please send them to him