Difference between revisions of "WBConfCall 2017-09-21-Agenda and Minutes"
From WormBaseWiki
Jump to navigationJump to search (Created page with " = Agenda and Minutes= == Grant renewal update == == AOB == = Minutes =") |
|||
Line 8: | Line 8: | ||
= Minutes = | = Minutes = | ||
+ | |||
+ | * Grant | ||
+ | ** On track. Will be pulled of Gdocs today to format, references etc. | ||
+ | ** People generally positive about the treatment of AGR | ||
+ | ** People also felt that the app shows sufficient innovation | ||
+ | |||
+ | * modENCODE tracks | ||
+ | ** Some of the modENCODE tracks mapped to wrong assembly and potentially superseded by new data | ||
+ | ** Proposal: create a JBrowse on the old assembly, and put the old modENCODE tracks there | ||
+ | *** Survey people to find out if anyone actually uses these tracks | ||
+ | |||
+ | * Regulatory features | ||
+ | ** Issue one: TF binding site features are not associated with genes | ||
+ | ** Issue two: they have opaque WBsf ids | ||
+ | ** Proposal: implement a method to associated TF binding site features with genes and give them human-readable names | ||
+ | *** Names possibly based on genes either side of the feature | ||
+ | ** Chris will push forward with this an bring others in where appropriate |
Latest revision as of 17:02, 21 September 2017
Agenda and Minutes
Grant renewal update
AOB
Minutes
- Grant
- On track. Will be pulled of Gdocs today to format, references etc.
- People generally positive about the treatment of AGR
- People also felt that the app shows sufficient innovation
- modENCODE tracks
- Some of the modENCODE tracks mapped to wrong assembly and potentially superseded by new data
- Proposal: create a JBrowse on the old assembly, and put the old modENCODE tracks there
- Survey people to find out if anyone actually uses these tracks
- Regulatory features
- Issue one: TF binding site features are not associated with genes
- Issue two: they have opaque WBsf ids
- Proposal: implement a method to associated TF binding site features with genes and give them human-readable names
- Names possibly based on genes either side of the feature
- Chris will push forward with this an bring others in where appropriate