Difference between revisions of "WBConfCall 2017-08-03-Agenda and Minutes"
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== Wormbase.com domain == | == Wormbase.com domain == | ||
| − | * Available on marketplace, $20,000 | + | * Available on marketplace, $20,000 (extortion?) |
== Outstanding help desk issues == | == Outstanding help desk issues == | ||
| Line 22: | Line 22: | ||
== modENCODE data == | == modENCODE data == | ||
* Should WormBase provide authoritative info about modENCODE data? Something to consider | * Should WormBase provide authoritative info about modENCODE data? Something to consider | ||
| + | |||
| + | == NAR paper == | ||
| + | * Comes out once a year | ||
| + | * Downside: we need to pay for it each time | ||
| + | * Raymond's proposal: each of three WB sites contributes a portion of the paper, each with a point person/representative; three representatives coordinate writing the paper and act as first authors? | ||
| + | * Todd, Paul K.: maybe better to stick to a single lead author to have consistent voice | ||
| + | * Raymond: each site knows the new features and issues to bring up; could try as an experiment | ||
| + | * Lincoln: Worth experimenting, but should state deadlines early on in case the experiment doesn't work | ||
| + | * Raymond asking for first draft submissions by August 15th (paper submission deadline ~September 15th) | ||
| + | * Hinxton will discuss with Kevin when he is back; OICR will discuss | ||
Revision as of 15:49, 3 August 2017
Contents
Agenda
1. wormbase.com now available on domain marketplace
Outstanding Help Desk Issues
- https://github.com/WormBase/website/issues/5790
- Request for information on how to submit expression data (Daniela replied) and alternatively spliced transcripts. Could someone reply to her about how to submit alternative splicing data?
- https://github.com/WormBase/website/issues/5755
- User asked about documentation on genome browser features, in particular about why some TF BS ChIP-Seq peaks are highlighted in orange and others are not. Do we have documentation describing the tracks, e.g. modENCODE tracks?
Minutes
Wormbase.com domain
- Available on marketplace, $20,000 (extortion?)
Outstanding help desk issues
- User wants to provide alternative splicing data
- User asking about TF binding site peak calls in modENCODE tracks in GBrowse; Scott will communicate with Gary W. and get back to user
modENCODE data
- Should WormBase provide authoritative info about modENCODE data? Something to consider
NAR paper
- Comes out once a year
- Downside: we need to pay for it each time
- Raymond's proposal: each of three WB sites contributes a portion of the paper, each with a point person/representative; three representatives coordinate writing the paper and act as first authors?
- Todd, Paul K.: maybe better to stick to a single lead author to have consistent voice
- Raymond: each site knows the new features and issues to bring up; could try as an experiment
- Lincoln: Worth experimenting, but should state deadlines early on in case the experiment doesn't work
- Raymond asking for first draft submissions by August 15th (paper submission deadline ~September 15th)
- Hinxton will discuss with Kevin when he is back; OICR will discuss
