Difference between revisions of "WBConfCall 2016.10.06-Agenda and Minutes"

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* They could serve as a User guide and are up-to-date. Would be good to have them published. Better to have them on WormBook? Status?
 
* They could serve as a User guide and are up-to-date. Would be good to have them published. Better to have them on WormBook? Status?
 +
 +
== AGR working group updates/action items ==
 +
 +
* Orthology
 +
** Panther data in WormMine
 +
*** Orthology data in WormMine seems *not* to come from WormBase / AceDB
 +
*** Need clarification on (a) what version of Panther was loaded, and (b) how it was loaded
 +
** Desired update frequency
 +
*** Proposal is to update orthologs once per year.  Are we happy with that?
 +
*** Should we adjust our update cycle to accommodate this?
 +
* Use case
 +
* Disease / phenotype
  
 
==2017 Worm Meeting==
 
==2017 Worm Meeting==

Revision as of 13:13, 6 October 2016

Agenda

WormBook chapters

ticket #5092 with reference to #5080 https://github.com/WormBase/website/issues/5092

  • Discussion on making available on WormBase the chapters we wrote for the WormBook.
  • There are 11 chapters so far -anatomy, genomic data, gene expression, phenotype, GO, Human disease, intermine, nomenclature, Process&Pathway, website, sequence homology.
  • They could serve as a User guide and are up-to-date. Would be good to have them published. Better to have them on WormBook? Status?

AGR working group updates/action items

  • Orthology
    • Panther data in WormMine
      • Orthology data in WormMine seems *not* to come from WormBase / AceDB
      • Need clarification on (a) what version of Panther was loaded, and (b) how it was loaded
    • Desired update frequency
      • Proposal is to update orthologs once per year. Are we happy with that?
      • Should we adjust our update cycle to accommodate this?
  • Use case
  • Disease / phenotype

2017 Worm Meeting

  • Workshop proposals deadline: 15th November 2016

Minutes