Difference between revisions of "WBConfCall 2014.08.07-Agenda and Minutes"
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== Human disease portal (Todd) == | == Human disease portal (Todd) == | ||
− | There is an idea to make the human disease data more accessible and extend the curation. | + | There is an idea to make the human disease data more accessible and extend the curation. Discussion items: |
+ | |||
+ | * Curation | ||
+ | ** What additional curation is needed, and how does it overlap with the Disease Relevance data that Ranajana has been collecting? | ||
+ | ** How should it be captured? | ||
+ | *** Approach 1: speadsheet, which is exposed directly on the web-site | ||
+ | *** Approach 2: traditional: in Postgres at Caltech, with dataflow into Ace (with new classes/tags) | ||
+ | ** Should we import the whole human and mouse canonical gene sets to facilitate this (and other things)? | ||
+ | * Display | ||
+ | ** What are the main anticipated use-cases? | ||
+ | * Orthology data in WormMine | ||
+ | ** would facilitate some of the necessary queries (e.g. what worm genes have human orthologs) | ||
+ | ** work underway to simplify the structure in Ace to make this easier (WS245) | ||
== HelpDesk == | == HelpDesk == | ||
= Minutes = | = Minutes = |
Revision as of 15:43, 5 August 2014
Contents
Agenda
Departures
- Abby, August 15th last day. Traditional serenade by the departed, Canadian song of her choosing.
New Starters
- Thomas Down
SAB 2014
Human disease portal (Todd)
There is an idea to make the human disease data more accessible and extend the curation. Discussion items:
- Curation
- What additional curation is needed, and how does it overlap with the Disease Relevance data that Ranajana has been collecting?
- How should it be captured?
- Approach 1: speadsheet, which is exposed directly on the web-site
- Approach 2: traditional: in Postgres at Caltech, with dataflow into Ace (with new classes/tags)
- Should we import the whole human and mouse canonical gene sets to facilitate this (and other things)?
- Display
- What are the main anticipated use-cases?
- Orthology data in WormMine
- would facilitate some of the necessary queries (e.g. what worm genes have human orthologs)
- work underway to simplify the structure in Ace to make this easier (WS245)