Difference between revisions of "WBConfCall 2014.02.20-Agenda and Minutes"
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=== WS242 === | === WS242 === | ||
+ | * See notes above | ||
* On FTP server early next week | * On FTP server early next week | ||
* Send Michael Paulini release notes stuff (e.g. Topic Curation) before/during weekend | * Send Michael Paulini release notes stuff (e.g. Topic Curation) before/during weekend |
Revision as of 17:28, 20 February 2014
Contents
Agenda
WormMine 240 on staging - Abby
- I've noticed some issues, please help me find them all before I rebuild
- http://staging.wormbase.org/tools/wormmine/begin.do
Outstanding Help Desk issues
- Help desk e-mail: Question regarding terms in annotation files (gff) (From: Assaf Gordon, Tue, November 12, 2013)
- Annotate Motif feature for use on other genomes (from Paul Sternberg, https://github.com/WormBase/website/issues/2001)
- Searching for relevant rearrangements, a la Mapping Data table on legacy site (from Monica Colaiacovo, https://github.com/WormBase/website/issues/2340)
- tkr gene class lab association (from Peter Barrett, Tue, February 18, 2014, https://github.com/WormBase/website/issues/2420)
- C06A1.4 link to sequence (gene + nt) does not work. (from Alexandra Bezler, Thu, February 20, 2014, https://github.com/WormBase/website/issues/2424)
- C06A1.4 is annotated as a 'coding pseudogene'. definition? (from Alexandra Bezler, Thu, February 20, 2014, https://github.com/WormBase/website/issues/2425)
WS242
- should be on the FTP site next week
- includes O.volvulus fixes for the Mitochondrion and CGC-names
- added N.americanus (clade Vb)as Tier III
- includes ncRNA updates for Tier IIs (and ncRNA biogenesis topic work)
- import of Inparanoid 8
- please send anything for the release notes
Minutes
SAB Meeting
- October 6-7, 2014
WS240 WormMine
- WormMine on staging; let Abby know of anything broken or missing
- Duplicate lines (one real and one empty object)
- Expr_pattern missing?
Outstanding help desk
- Assaf Gordon e-mail (Paul Davis will respond)
- Annotate Motif feature for other genomes; possible and in the pipeline
- Rearrangments table and search; not yet ported over from legacy, but recognized as useful; in the pipeline
- tkr gene class attribution; Chris will forward request to Tim Schedl
- Coding pseudogene question (Paul Davis responding)
WS242
- See notes above
- On FTP server early next week
- Send Michael Paulini release notes stuff (e.g. Topic Curation) before/during weekend
WS241
- Goes into production next week