Difference between revisions of "WBConfCall 2013.11.21-Agenda and Minutes"

From WormBaseWiki
Jump to navigationJump to search
Line 69: Line 69:
  
 
== SAB ==
 
== SAB ==
 +
 +
=Minutes=

Revision as of 17:38, 21 November 2013

Agenda

Please add your agenda items here.

WS241 models

WS241 models summary WS241 Models.wrm

Curators to check their model proposals in this file: WS241 pre-WS241 tagged models [pre-WS241]

1) ?Person class

2) ?Interaction and ?Feature models

3) ?Movie and Expression_pattern changes

3.1) Expr_pattern

3.2) Movie

4) ?Protein Class

5) Extras from the deadline call

5.1) ?Expression_cluster and ?Analysis class - Wen

5.2) ?DO_term - Ranjana

Outstanding Help Desk issues also known as house keeping

Wen: These are help desk issues that are still open, please reply or close them if the issue is resolved. - not all helpdesk??

The following are related to GFF3 implementation - no need to discuss individually on the call.

  • [2019] - gff3 implementation no discussion necessary until gff3 code is ready?
  • [2026] - gff3 implementation no discussion necessary until gff3 code is ready?
  • [2028] - gff3 implementation no discussion necessary until gff3 code is ready?
  • [2029] - gff3 implementation no discussion necessary until gff3 code is ready?
  • [2030] - gff3 implementation no discussion necessary until gff3 code is ready?
  • [2031] - gff3 implementation no discussion necessary until gff3 code is ready?
  • [2032] - gff3 implementation no discussion necessary until gff3 code is ready?
  • [910] - gff3 implementation no discussion necessary until gff3 code is ready?


Other issues:

  • [1939] Blast tool changes
  • [1549] Extra table in Associations widget-Anatomy page
  • [1890] original problem fixed but TreeFam image still looks messed up
  • [2022] Can we scale TreeFam Image?
  • [1999] n1774 listed as sequenced but location is not known.
  • [2009] Look for wormmine model browser
  • [2012] Discussion about curation of pers. Comm [Mary Ann: The pers. comm part of this ticket is resolved, but attaching evidence to manual annotation from external curation groups is still under discussion] - NOT HELPDESK
  • [2015] External URL, karen and Abi are working on this
  • [2016] External URL, karen is working on this - NOT HELPDESK
  • [2017] slt-1 gene page is still suggesting that the gene hasn't been physically mapped, but clearly has a sequence:
  • [2018] Molecular Details widget not displaying properly on any variation page on Staging site - NOT HELPDESK
  • [2021] WikiPathway images on Topic pages - NOT HELPDESK
  • [2027] 'Associations' widget consistently timing out on the 'nucleus' GO Term page on Staging - NOT HELPDESK
  • [2034] WormMine Qury builder is looking for RNAi data although we have none
  • [2037] asked for a bunch of tracks got back Bio::GRahics error......
  • [2041] Resource Identification in the Literature project
  • [2043] vab-3 doesnt have a location on the gene page. Please fix. -- closed
  • [2044] hlh-2 does not have a gene structure either -- closed

There are lots of other issues in the system not listed here, but will be worked on when time allows.

SAB

Minutes